LOCUS BC051766 2064 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens translin-associated factor X interacting protein 1,
mRNA (cDNA clone IMAGE:5588349), with apparent retained intron.
ACCESSION BC051766
VERSION BC051766.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2064)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2064)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: a Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923845
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2064
/db_xref="H-InvDB:HIT000099405"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5588349"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 600 a 496 c 597 g 371 t
ORIGIN
1 ctgccaagcc ccagtacttg gaggaactgg aaaactacct acgcaaggag ctcctcctgc
61 tggacctggg cacagattcc acccaggaac taaggctgca gcccaccaaa gggagaagat
121 tcgggctctg gagcccctga aggccaagct tgtcactgtg aatgaggact gcaatgagag
181 gatcctggcc atgagagctg aggagaaata tgaaatctcc ctgctcaaga aagagaagat
241 gaacttgcta aaactcatcg acaaaaagaa tgaggagaag atttcattgc agagcgaggt
301 gaccaaactg aggaagaact tggctgagga gtacctgcac tacctcagtg agcgagatgc
361 ctgtaagatc ctcatcgcag acctgaatga gctgcggtac cagcgggagg acatgtcatt
421 agcccagtcg ccaggcatct ggggggagga ccctgtgaag ttaaccctgg ctcttaagat
481 gacccggcaa gacctgaccc gcacgcagat ggaactcaac aacatgaagg ccaactttgg
541 agatgtggtc cccaggaggg actttgaaat gcaggagaag accaacaagg atcttcagga
601 gcaggtgctg gcaggcaggc agggccagga gggtaggacg gggtctcaca ggtggggggc
661 cagggccaat gtccttgccc acagctggac accctgagag ccagctacga ggaggttcgc
721 aaggagcatg agatcctcat gcagctgcac atgagcacgc tgaaggaacg ggaccaattc
781 ttctctgagc tgcaggagat ccagcgcact tccacgccgc ggcctgactg gaccaagtgc
841 aaaggtgagg gcagccggca gggccccagg tcctgcttac atgtgggccc agactccagc
901 tccctctccc cacatgcaga tgtggtggct gggggcccag agcgctggca gatgctggct
961 gagggcaaga acagcgacca gctggtggac gtgctcctgg aagagattgg ttcggggctg
1021 ctgcgggaga aagacttctt ccctggtctg ggctatgggg aagccatccc tgcttttctt
1081 cggtttgatg gcctcgtgga gaacaagaag ccaagcaaga aggacgtggt caacctcctc
1141 aaggatgcct ggaaggaacg tcttgctgag gagcagaaag agacgttccc agatttcttc
1201 ttcaatttcc tggagcatcg ctttgggccc agtgatgcca tggcctgggc ttatactatt
1261 tttgaaaata tcaagatctt ccactccaac gaggttatga gtcagttcta tgcagtcttg
1321 atgggaaagc ggagtgagaa tgtgtatgtc acccagaagg agacagtagc ccagctgctg
1381 aaggagatga caaatgctga cagtcagaac gaggggctac taaccatgga gcagttcaac
1441 actgtcctca agagtacctt ccctctcaag acagaagagc aaatccagga gctgatggag
1501 gcagggggct ggcatcccag cagcagcaat gcagacttgc tcaactaccg ctcactgttt
1561 atggaggatg aggagggcca gagtgagccc tttgtgcaaa aactctggga acaatacatg
1621 gatgagaagg acgagtactt acagcagcta aagcaggagc ttggcataga actccatgag
1681 gaagtgactc tgcccaagct gcgagggggc ctgatgacca tcgaccccag cctggacaag
1741 cagacagtga acacctacat gagccaggcc ttccagctcc ctgagtcgga aatgccagag
1801 gagggtgacg agaaggaaga agccgtggtg gaaatcctcc agactgccct ggagcggctt
1861 caggtgattg acatcaggcg tgtgggacct cgagagccag agcctgcaag ctaggaactt
1921 gtgggcagcc tgcgtactcc agtcctgcta acccctagct tttaatataa aagtgtttgt
1981 ctgaatccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aaaaaaaaaa aaaaaaaaaa aaaa
//