LOCUS BC051724 4442 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens chromosome 4 open reading frame 41, mRNA (cDNA clone
MGC:48447 IMAGE:5265781), complete cds.
ACCESSION BC051724
VERSION BC051724.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4442)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4442)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: p Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39995077.
FEATURES Location/Qualifiers
source 1..4442
/db_xref="H-InvDB:HIT000099376_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48447 IMAGE:5265781"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4442
/gene="C4orf41"
/db_xref="GeneID:60684"
/db_xref="HGNC:HGNC:25751"
CDS 147..3407
/gene="C4orf41"
/codon_start=1
/product="chromosome 4 open reading frame 41"
/protein_id="AAH51724.1"
/db_xref="GeneID:60684"
/db_xref="HGNC:HGNC:25751"
/translation="MSPTQWDFPVELCCRPMAFVTLTGLDVVYNAVHRAVWDAFCANR
RADRVPISFKVLPGDHEYPKCRPKRASYEWYIPKGILKTGWMNKHLNLVPALVVVFYE
LDWDEPQWKEKQSECATRVEIVRQSLQGRNTKVAVVLIQKKTPLPPGEDVIASERAAA
LCNACELSGKSLFVLPHTDHLVGYIIRLENAFYEHALTYYYTEIRRVKSHKEFLNKTT
HQLLFVRHQFKIAFFSELKQDTQNALKNYRTAYNLVHELRAHETNILEIKTMAGFINY
KICRLCFQHNTPLDAIAQFRKHIDLCKKKIGSAELFFEHDAWMSKQFQAFGDLFDEAI
KLGLTAIQTQNPGFYYQQAAYYAQERKQLAKTLCNHEASVMYPNPDPLETQTGVLDFY
GQRSWRQGILSFDLSDPEKEKVGILAIQLKERNVVHSEIIITLLSNAVAQFKKYKCPR
MKSHLMVQMGEEYYYAEDYTKALKLLDYVMCDYRSEGWWTLLTSVLTTALKCSYLMAQ
LKDYITYSLELLGRASTLKDDQKSRIEKNLINVLMNESPDPEPDCDILAVKTAQKLWA
DRISLAGSNIFTIGVQDFVPFVQCKAKFHAPSFHVDVPVQFDIYLKADCPHPIRFSKL
CVSFNNQEYNQFCVIEEASKANEVLENLTQGKMCLLPGKTRKLLFKFVAKTEDVGKKI
EITSVDLALGNETGRCVVLNWQGGGGDAASSQEALQAARSFKRRPKLPDNEVHWDSII
IQASTMIISRVPNISVHLLHEPPALTNEMYCLVVTVQSHEKTQIRDVKLTAGLKPGQD
ANLTQKTHVTLHGTELCDESYPALLTDIPVGDLHPGEQLEKMLYVRCGTVGSRMFLVY
VSYLINTTVEEKEIVCKCHKDETVTIETVFPFDVAVKFVSTKFEHLERVYADIPFLLM
TDLLSASPWALTIVSSELQLAPSMTTVDQLESQVDNVILQTGESASECFCLQCPSLGN
IEGGVATGHYIISWKRTSAMENIPIITTVITLPHVIVENIPLHVNADLPSFGRVRESL
PVKYHLQNKTDLVQDVEISVEPSDAFMFSGLKQIRLPAQAFYTYQYFCQATGSTHG"
BASE COUNT 1375 a 861 c 966 g 1240 t
ORIGIN
1 ggcggtgggg ctgcggcggt ggggacgggc cacggcgttc tgtgacatcc ccccgcctcc
61 cctcgtcttc tcccggctgg cggcgaccgg cctcagctgc agcgggcccg gggcgtgggg
121 cctgggtttt ttgtgacatc gtaaacatga gccccacaca gtgggacttc cctgtggaat
181 tatgttgccg gcctatggcc tttgttactc taacgggcct ggatgtagtt tataatgcag
241 tccatcgagc tgtctgggac gccttctgtg caaatcggag agctgatcga gtaccaattt
301 ctttcaaggt gctcccaggt gaccatgagt atcccaaatg tagacccaag agagcttcat
361 atgagtggta cattcctaaa gggatcttaa agactggctg gatgaataag catctgaatc
421 tggtgccagc cctggtggtt gtgttctatg aactggactg ggatgagcct cagtggaaag
481 aaaagcagtc tgagtgcgcc accagagtgg aaatagtcag gcaaagttta caaggaagaa
541 acacaaaagt tgcagtggtt ctgattcaga agaaaacccc tttgccccca ggagaagatg
601 tcattgcttc agaaagggct gcagctttat gcaatgcatg tgaactctca ggaaagtctt
661 tgtttgtact gccgcacact gaccaccttg tgggttatat tataagattg gaaaatgcct
721 tttatgaaca tgcactgact tattactaca ctgagatcag aagagtgaaa tctcataaag
781 aatttttgaa taaaacaaca caccagcttt tatttgttag gcatcagttc aaaatagctt
841 tcttcagtga gttgaaacaa gatacacaaa atgcgctgaa gaattatagg accgcctata
901 atcttgtaca cgaattgaga gcccatgaaa ctaatattct ggaaattaag actatggcag
961 gatttataaa ctacaagatc tgtaggctgt gttttcaaca caacacccca ttggatgcaa
1021 ttgctcagtt ccgaaaacac atcgacttgt gtaagaaaaa gattggaagt gcggagctgt
1081 tttttgagca tgatgcatgg atgtctaaac aattccaggc ctttggagat ttatttgatg
1141 aagctattaa gttagggtta acagctattc aaactcagaa tcctggtttc tattaccagc
1201 aggcagcata ctatgcccag gagcggaaac agcttgcaaa aaccctctgt aaccacgaag
1261 cttctgtaat gtatcccaat cctgatccct tagaaacaca aacaggcgtt cttgactttt
1321 atggacaaag atcatggcga caaggaatac taagttttga tctttctgat cctgaaaaag
1381 aaaaggtggg aattcttgcc attcagctga aggagagaaa tgttgttcac tctgagataa
1441 tcataactct tctgagcaat gctgttgcac agttcaagaa gtataagtgc ccgcgaatga
1501 aaagtcacct aatggttcag atgggagagg aatattatta cgcagaggat tataccaaag
1561 ctttgaagtt gctggattat gtgatgtgtg attatcggag tgaaggatgg tggactctgc
1621 tcacttctgt attaactaca gctctgaagt gctcctacct catggcccaa ttaaaggatt
1681 acattactta ctccctagaa ctccttggta gagcttcaac tctgaaagat gaccagaagt
1741 ctcggataga aaagaacctc ataaatgttt taatgaatga aagtcctgat ccagaacccg
1801 actgtgatat cttagctgtg aaaactgctc agaagctgtg ggcagaccga atttctctgg
1861 ctggcagcaa tattttcaca ataggagtac aggactttgt gccatttgtg cagtgcaaag
1921 ccaagtttca tgccccaagt tttcatgttg atgttcctgt tcagtttgat atttatctga
1981 aggctgattg tccacatccc attaggtttt ccaagctctg tgtcagcttt aataatcagg
2041 aatacaacca gttctgtgta atagaagaag catccaaagc aaatgaagtt ttagaaaatc
2101 tgactcaagg aaagatgtgc ctacttcctg gcaaaacaag aaaactgtta tttaagtttg
2161 ttgcaaaaac tgaagatgtg ggaaagaaaa ttgagattac ttcagtggat cttgctctgg
2221 gcaatgagac gggaagatgt gtggttttaa attggcaggg aggaggagga gatgctgctt
2281 cctcccaaga agccttacag gcagctcggt ctttcaaaag gcgacctaag ctacctgaca
2341 atgaagttca ctgggacagc attataattc aggcaagcac aatgatcata tccagagtcc
2401 caaacatttc tgtacatctg ctacatgaac cccctgcact gactaatgaa atgtattgtt
2461 tggttgtgac tgttcagtcc catgaaaaga cccaaatcag agatgtgaag ctcaccgctg
2521 gcttaaaacc aggacaggat gccaatttaa ctcagaagac tcacgtgact cttcatggaa
2581 cagaactgtg tgatgaatcc tacccggctt tactcactga cattcctgtt ggagacttac
2641 atccagggga acagctggaa aaaatgttgt atgttcgctg tggaacagtg ggttccagaa
2701 tgtttcttgt atatgtttct tacctgataa atacaaccgt tgaagaaaaa gaaattgttt
2761 gcaagtgtca caaggatgaa actgtaacaa ttgaaacagt ctttccattt gatgttgcgg
2821 ttaaatttgt ttctaccaag tttgagcacc tggaaagggt ttatgctgac atcccctttc
2881 tgttgatgac ggacctctta agtgcctcac cctgggccct cactattgtt tccagtgagc
2941 tccagcttgc tccatccatg accacagtgg accagctcga gtctcaagtg gacaatgtta
3001 tcttacagac tggagagagt gctagtgaat gcttttgtct tcaatgccca tctcttggaa
3061 atattgaagg tggagtagca accgggcatt atattatctc ttggaaaagg acctcagcaa
3121 tggagaatat ccccatcatc acaactgtca tcactctgcc gcacgtgatt gtggagaata
3181 tccctctcca tgtgaatgca gatctgccgt catttgggcg tgtcagagag tcgttacctg
3241 tcaagtatca cctacagaat aagaccgact tagttcaaga tgtagaaatt tctgtggagc
3301 ccagtgatgc cttcatgttc tcaggtctca aacagattcg attacctgct caggcgtttt
3361 atacctacca gtatttttgt caagccacag ggtcgactca tggatgatac ctctattgct
3421 gctgcatgat gttcaagacc ggcccttggc tgttgttaca gagatgttgg gcagagctat
3481 gcaggtgttt cattgtgaac tctagctttg atcatggtaa aaagttaacc ttttctattt
3541 tttaatggat gttataccaa ctattcagag gaactcatac ttcaaaaata ttaggaaaat
3601 ctgtcttata gtttctctaa taaatatctg aaatctcagt acgacatgaa agaatgtcag
3661 accattgtta ttgttgaaag tcatttgatg aatggtaaat tctatgaaaa gtaagtgatt
3721 tgcatgtata atatcaggaa aattaagcat cccaagtgtg actggacaaa gagagcagat
3781 gcaccagtgc ctgtgccata aagttccgaa tcccccatgt gtctctttca gagctggcca
3841 gaccggaaat aaatcattct cataaattca gtgtgtactc agaacacata cacaacaaca
3901 tagggagttg tatgactgat acggaaaact tccagaaagt tttaatcaaa gcagtttaat
3961 taaggtatca aaaatatctt tgcttactat caagaagtgt caaataggtt cagcttgctg
4021 ccaaaatatg gatcatttat gaagcaggtt catattttag aggtgttaat aaaatcctca
4081 tcggaaaaga tccaaagtgc aaggatttga ttataaacat aatttcctag actgaaagtt
4141 tttggaaaag atgcagggtc tgagtcaggc cttctggtta tattgtgcag tttcaaaaga
4201 actatttaaa actcttgaaa actcatgtaa ataaaaatca tagggtgaaa attgtatttg
4261 ttaaaatacc ttaataattt aaaatgacct gatttcctgg aaaattttat tattcaaaag
4321 gtggaggcat tgtaaaaagg aaatagtgat gtaaataaac atgttctctt tcaaaaaaaa
4381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4441 aa
//