LOCUS BC051723 3442 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens component of oligomeric golgi complex 6, mRNA (cDNA
clone MGC:48438 IMAGE:5263056), complete cds.
ACCESSION BC051723
VERSION BC051723.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3442)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3442)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: o Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33457343.
FEATURES Location/Qualifiers
source 1..3442
/db_xref="H-InvDB:HIT000053663"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48438 IMAGE:5263056"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3442
/gene="COG6"
/gene_synonym="COD2"
/gene_synonym="KIAA1134"
/db_xref="GeneID:57511"
/db_xref="HGNC:HGNC:18621"
/db_xref="MIM:606977"
CDS 51..2024
/gene="COG6"
/gene_synonym="COD2"
/gene_synonym="KIAA1134"
/codon_start=1
/product="component of oligomeric golgi complex 6"
/protein_id="AAH51723.1"
/db_xref="GeneID:57511"
/db_xref="HGNC:HGNC:18621"
/db_xref="MIM:606977"
/translation="MAEGSGEVVAVSATGAANGLNNGAGGTSATTCNPLSRKLHKILE
TRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELE
SISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKF
QLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALL
QETAYERLYRWAQSECRTLTQESCDVSPVLTQAMEALQDRPVLYKYTLDEFGTARRST
VVRGFIDALTRGGPGGTPRPIEMHSHDPLRYVGDMLAWLHQATASEKEHLEALLKHVT
TQGVEENIQEVVGHITEGVCRPLKVRIEQVIVAEPGAVLLYKISNLLKFYHHTISGIV
GNSATALLTTIEEMHLLSKKIFFNSLSLHASKLMDKVELPPPDLGPSSALNQTLMLLR
EVLASHDSSVVPLDARQADFVQVLSCVLDPLLQMCTVSASNLGTADMATFMVNSLYMM
KTTLALFEFTDRRLEMLQFQIEAHLDTLINEQASYVLTRVGLSYIYNTVQQHKPEQGS
LANMPNLDSVTLKAAMVQFDRYLSAPDNLLIPQLNFLLSATVKEQIVKQSTELVCRAY
GEVYAAVMNPINEYKDPENILHRSPQQVQTLLS"
BASE COUNT 1106 a 619 c 700 g 1017 t
ORIGIN
1 gtggtccctg cctggctgag gtggcagcag ggggcgggac gcgcagcgct atggcagagg
61 gcagcgggga agtggtcgca gtgtctgcga ccggggctgc caacggcctc aacaatgggg
121 caggcgggac ctcggcgacg acctgcaacc cgctgtcgcg caagctgcat aagatcctgg
181 agacgcggct ggacaacgac aaggagatgt tagaagctct caaggcactt tcaacctttt
241 ttgttgaaaa tagtctgcgg actcgaagaa atttacgtgg agatattgaa cgtaaaagtt
301 tagccatcaa tgaagaattt gtaagcattt tcaaggaagt gaaggaggaa cttgaaagca
361 taagcgaaga tgttcaagca atgagcaact gttgtcaaga tatgacaagt cgcctacagg
421 cagcaaagga acagactcaa gatttaatag taaaaaccac taagcttcaa tctgaaagcc
481 aaaaattaga gataagagct caagttgcag atgccttctt atccaagttc caactgactt
541 ctgatgaaat gagtcttctc cgaggtacaa gagaaggacc cattactgag gattttttca
601 aggcactggg aagagtaaaa cagattcata atgatgtcaa agttctcttg cgtacaaatc
661 aacaaacggc aggtttagaa attatggaac agatggcctt acttcaagaa acggcttatg
721 aaagacttta ccgatgggct caaagtgaat gcagaacatt gacacaagaa tcatgtgacg
781 tatctccggt attgacacag gcaatggaag ccctgcagga cagacctgtc ttatataaat
841 ataccttaga tgaatttgga acagccagaa gaagtacagt tgttcgtgga tttattgatg
901 cgctcacaag agggggcccc ggaggtacac ctagaccaat tgaaatgcat tctcatgacc
961 ctttgaggta tgtaggagat atgttggctt ggctccatca agctactgct tctgaaaagg
1021 aacaccttga agctctctta aagcatgtaa ctacacaagg tgttgaagaa aatattcaag
1081 aagttgttgg gcatatcact gaaggtgtgt gcaggcctct aaaggttcga attgagcaag
1141 taatagttgc tgaacctggg gcagttttat tatataaaat ttctaatctc ctcaaatttt
1201 atcaccatac aatcagtggt attgttggaa atagtgcaac tgcattattg actaccattg
1261 aagaaatgca tttgctaagc aaaaaaatat tcttcaatag cttgagtctt catgcaagta
1321 aattaatgga caaggttgaa ctcccaccac ctgatcttgg accaagttct gcactaaatc
1381 agacactcat gttgctgcgt gaagttttag catctcacga ttcttcagtt gtaccattag
1441 atgctcgtca agctgatttt gtgcaggttt tatcatgtgt cttggatcct ctcctacaga
1501 tgtgtactgt atcagccagc aatttaggca cagctgacat ggccactttc atggtcaatt
1561 cactatatat gatgaagaca acattagctc tatttgaatt cactgacaga cgtctggaaa
1621 tgctacagtt tcagatcgaa gcacatttgg acacacttat aaatgagcaa gcctcttatg
1681 ttttaactag ggtaggcttg agttacatct ataacactgt acagcaacat aaacctgaac
1741 agggctcttt agctaatatg cccaacctag attctgtgac actgaaggct gcaatggttc
1801 agtttgatcg ttatctgtca gccccagaca acctattgat accacagctg aactttcttc
1861 taagtgccac agtgaaagag cagatcgtaa aacaatctac agaattagtc tgcagagcct
1921 atggtgaagt gtatgcagcc gtgatgaatc caatcaatga atacaaagat ccagagaaca
1981 ttcttcaccg atcgccgcag caagtgcaga cgcttctttc ctgattatct tatttcattg
2041 tgttagcaaa atatgacctc cctaaaacac tgaaggttat tttttattct ttgaattttt
2101 actctataat ttgatagtta cagttttctt tgtatcataa gattgtaagt cccgataatt
2161 tttttttttt tggtctcagt aacagggaag taagtaacat gttgacctga gctagtatta
2221 ctgtgtatct actctaaatg agatgatcta tttttttgct agccatctct ccagctctgc
2281 agttttcact gtattcagga agcataaagt agtatgaaag gtttgaagaa ttttttttta
2341 caagactagt tctaaattaa cagcttataa aaaatttgtc taaatttaat aattagtata
2401 aggatatgac ctaataaatg tctccttacc taaagattca tttgctttct tttaatatga
2461 gtaggcatac ttagtagctt ttctgaacct agcctatgtc tctgtcccca aaatagctgc
2521 ccttaaagag ttgttagcag agagaaaaat aacagtgaat gtgctcctgg tgtatatggc
2581 agtgaatctc ctttctgttc tactttagca tactatatat atttgactgt gtacattctt
2641 atgcaatttt aagtatacac tcagcaataa ttagaaaaaa aggagagaga aaagtgattt
2701 aaacagggtg gattccactc tgtgggagcc ttcgatggaa ctcaaggtgg agctcagcct
2761 ttccaatgag ctctaagcat gtagatagcc tgagctgtgt ctaagcctgg tgtttaaaga
2821 tgggtatttg tcatacaata tgggtcctaa atccaaccaa ctacacattt tatctggtgt
2881 tcaaaccaaa gaaacaatga tctactcaaa cattggagaa aaaaactgcc agaggaggag
2941 ttgccaattg gcagtgtgtc ttatctccat gttgtaactg gactctgact ttagaccatt
3001 acctattagg aagattaaaa atgactgtat ttttaaagga ataaatccca gtgtgcctga
3061 tttgacattc ttgtcggcaa aaaaaaactt aatttctagt aaatctataa aaatgggtaa
3121 gtccctaaat tacaaatgag aaaattgaag cacaaggaaa aaaataacta gtttgaaata
3181 ttttgaaaag taataacata aaactagtat ttgtagaaga ttatgtgttg tatataacaa
3241 attagtattt atagaatatg acctatttat ctgaagttta taattgttta tacctaatac
3301 agttcttttt ggagtaagaa tgattatata atcgttatcc atttgggtat aaatctgtat
3361 ttttagtttt ttccctttga ttagtatgtg ttacatataa agacagaaaa taaagtataa
3421 atcaagaaaa aaaaaaaaaa aa
//