LOCUS BC051688 3668 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens PNMA-like 1, mRNA (cDNA clone MGC:51034 IMAGE:5295669), complete cds. ACCESSION BC051688 VERSION BC051688.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3668) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3668) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 91 Row: i Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39780596. FEATURES Location/Qualifiers source 1..3668 /db_xref="H-InvDB:HIT000053651" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:51034 IMAGE:5295669" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3668 /gene="PNMAL1" /db_xref="GeneID:55228" /db_xref="HGNC:HGNC:25578" CDS 264..1583 /gene="PNMAL1" /codon_start=1 /product="PNMA-like 1" /protein_id="AAH51688.2" /db_xref="GeneID:55228" /db_xref="HGNC:HGNC:25578" /translation="MSKTMAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLN GVLSPLGPYRVLNKIFVREENVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQ DAEFLKNLNEFLDAEGRTWEDVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQI IFCMDAEIRSREEARAQEAAEFEEMAAWALAAGRKVKKEPGLAAEVGSALKAETPNNW NATEDQHEPTKPLVRRAGAKSRSRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEV GDAESMAISEPIKGSRKPCVNKEELALKKPMAKCAWKGPREPPQDARAEAESPGGASE SDQDGGHESPPKKKAVAWVSAKNPAPMRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKG PGSRREASDQKAPRGQQPAEATASTSRGPKAKPEGSPRRATNESRKV" BASE COUNT 939 a 860 c 1007 g 862 t ORIGIN 1 gctaacggca tcgagtctgg acgccccgtg acccgcctgg gccggagcga gggcggacgg 61 cgccttcttg gccctttctg cctctagcag cggcgccggg gtagccggag ccagcgactg 121 ggaaacggct gcattccact gcgtctcctt ggcctggctg ggcggtcgga ggctggtctg 181 ccaagattac tgtttggaga ccgctgcagc ccacgtccac ctgatagact atttactaca 241 catagtagat tcagagccgc taaatgtcca agaccatggc gatgaacctt ctggaggatt 301 ggtgcagggg aatggaagtg gacatccaca ggtccttgtt ggtcacaggc atcccagagg 361 actgtgggca ggcagaaatt gaggagacct tgaatggggt cctctcccca ctgggcccgt 421 accgcgtgct caacaagatt tttgtgaggg aagagaatgt taaagctgcc ctcattgagg 481 ttggtgaagg tgtgaatctg agcaccatcc cccgtgaatt cccaggaagg ggtggtgtct 541 ggagagtggt ctgtagagac cctacccagg atgccgagtt tttaaaaaat ctgaatgaat 601 tcctggatgc cgaggggcgc acctgggagg atgtggtccg cctgctccag ctcaaccacc 661 ccaccctgtc ccagaaccag catcagcccc cagagaactg ggcagaagct ctgggggtgc 721 ttctgggagc agtggtgcag atcatcttct gcatggatgc cgagatccgc agccgggagg 781 aagccagggc ccaggaggcc gctgaattcg aggagatggc agcctgggct ttagcagcag 841 ggaggaaggt gaagaaagaa ccggggcttg cagcagaggt gggttctgcc ttaaaggcag 901 agacccccaa caactggaat gccacggaag accagcatga gcctaccaaa cctttggttc 961 gcagggctgg agctaagtct cgctccagga gaaagaagca gaagaagaac tccaggcagg 1021 aagcagtgcc ctggaaaaaa cccaaaggca tcaattccaa cagcacagct aacttggagg 1081 atcctgaggt gggtgatgct gaaagcatgg cgatctcaga gccgatcaag ggcagcagaa 1141 agccctgtgt gaataaggag gagttggctt tgaagaagcc catggcgaaa tgtgcctgga 1201 agggtcccag agagccacct caggatgccc gggcagaagc cgagagccca ggaggcgcct 1261 ctgagtcaga ccaagatggt ggccatgaaa gcccaccaaa gaagaaggcc gtggcctggg 1321 tgtctgccaa gaaccccgct cccatgagga agaagaagaa ggtgagcttg ggccctgtct 1381 cctacgtctt ggttgactca gaagatggca ggaagaagcc ggtgatgcca aagaaagggc 1441 caggctcaag aagggaggca tcagatcaga aggcccctcg gggccagcag cctgccgagg 1501 caacagcctc aacctctagg ggtccgaagg ccaagccaga aggctctcct cggcgtgcca 1561 ccaatgaatc cagaaaggtt tgatctgggg gaccacccat actgaggagt tgaaagaaca 1621 aggaagacgt accaagtcaa ccaagttctc tcttgtcact gaataagact ttggactctc 1681 ttagggcccc tgttgataga gatctggccc tgaggtaaac gataggtgag gtcttgggtg 1741 ggagggagtt ggggaaggga ggtggatctc tatgcccttt tctctaccag gcctgccgtt 1801 tcaccgcctt ctctactcac cttctcttcg gaggcaggag agttggtaag aggattggga 1861 aaattctaga acattcattc ccctttatgc atgagcaggg tcactgttac actcatccat 1921 gttcagcttt tctcccccac gccttgctcc ctcctcggaa tggtcagcga cctctgcagg 1981 ccctggcatt tggaagagct gggtggccct gccatattct tcctcccgcc ttcctcttgt 2041 gtaaccagcg gggtaagtta agccaggacc ttcgctgcaa acctggtttt attgctcctt 2101 cagtctccag cttccatcct ccagttatct agccaggagg tcccaagagt tagttttagg 2161 gaaaaagaat gtctgcctag acctcaaagt ctttgagttt tagagtctgt tagtaaaaat 2221 ggcactttga ttcccatttg ggatgagccc tctcaggaat cctgtgggga aggggggtga 2281 ttatagggaa ggacgcaggc attcctaggt ccccagctct aattccatcc atctacccaa 2341 ctgtcaccat ctttgcacca aactgtcacc atctttgcag cagaaggtca ctactcacat 2401 tatagtaaga ggggaaaaaa atcttttaaa acttggctgt tggccgggca cggtggctca 2461 cgcctgtaat cccagcactt tgggaggctg aggcaggtcg atcacgaggt caggcgttta 2521 agacaagctt gaccaacatg gtgaaacccc atctctacaa aaattagctg ggcgtggtgg 2581 cgcgcgcctg taatcccagc tactcaggag gctgaggcag atgaattgct tgaatccagg 2641 aggcagaggt tgcaatgagc caagattgtg ccacggcact ccagcctggg cagcagagtg 2701 agactctctc tcaaaaaaac aaaacttggc tgttaatgtc tgccctctga attcagacac 2761 actatattag accagaccac catgtgtcat tgtgtgtgtg tgtgtgtgtg tgtgtgtttg 2821 cgtgcgcatg tgtagaggag agagcagggt ccctgagata atggtttcca aactgtatcg 2881 tagccgtcca caaagatgta atccaaatct atttttctca cgtgtttaaa aaactgaaaa 2941 gtgactactc agatatgttg gaagtcacat cgaagactat cagaatatta ccttgtgttc 3001 ataggttaac ttgtttttgt acacgtctta gttatttcag gcatctcttt gcttaaaatt 3061 gagtttcttg taaatgtgac tgatgagcga ggttagaagt ggaagaaatt cctgtgcatg 3121 ttctataatc tgacaccctg aaagcaagtt tcctttcgtc attcacatgc tcttgttctg 3181 ccgtgactgt tcaggtgtat ggtagtaagt aaatgtatta acatggtgaa cagtagtaat 3241 attctatcat agagtattag cccttgcaag ttttcagggc gtcttttccg acttcagttt 3301 ttgtgataaa gaatgtgaac agttgttaga tgttctcagt gattcaactt taaaacaaat 3361 ttctcgtgat gattcatttc aaaatcctga gtgagtctga ctgaaaaata cgagagaaaa 3421 gagagtggtt tccgtttgca gctacacagc tgtgtgcatc gacgttctcc tggggtgtgt 3481 gccaagcgaa acccaggggt gaattggatt cttgaagaga ccaaagcctg taactgtcca 3541 gcttctaatt tcaaaacggg tccattaggg cttcgttgtg ttaacaagtt gacaccatga 3601 ctagtaaatg taaacgtgta tgtataaaat aaagtttagc aaattaagtg tcaaaaaaaa 3661 aaaaaaaa //