LOCUS BC051654 4515 bp mRNA linear HTC 19-OCT-2006
DEFINITION Homo sapiens cDNA clone IMAGE:5299601, containing frame-shift
errors.
ACCESSION BC051654
VERSION BC051654.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4515)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4515)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: k Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30089949
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..4515
/db_xref="H-InvDB:HIT000099354"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5299601"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1292 a 983 c 1044 g 1196 t
ORIGIN
1 agcgccgggg acgcggcctc agcaggggcg ccccgccacg gggagcagcc caggcgctcg
61 ccccaggacg ttgtccggcg ggctgggctg ggacccctct gcctccaggg cgcgtcggga
121 gcagcaggga tcggtgccgc gccgtgaggg tgcgcagagg ctgccctcgg gcccgctacc
181 cacagaccct ccgcggggca gcgtctccgg gccggccgcg ccctggtccg ccgaccgcag
241 acgacttgtg acacggacgg cgcgtcctgc tgaccccagc cagcgccgag ggcttggaat
301 ctcgagcggg aaaagactac catggctgca ggagtcttgc ctcagaatga acaaccatat
361 tctaccttgg tgaataacag cgagtgtgtt gcaaacatga aaggaaattt agaacgtcca
421 acaccaaagt acacaaaagt aggggagcgt ttacagcatg tcattcctgg acacatggca
481 tgttccatgg cgtgtggcgg tagagcttgc aagtatgaga acccagcccg ctggagtgag
541 caggagcaag ccattaaggg ggtttactca tcctgggtca ctgataatat actggccatg
601 gccagcccat cctctgagct cctggagaag taccacatca ttgatcagtt cctcagccat
661 ggcataaaaa caataatcaa cctccagcgc cctggtgagc atgctagctg tgggaaccct
721 ctggaacaag aaagtggctt cacatacctt cctgaggctt tcatggaggc tggcatttac
781 ttctacaatt tcggatggga ggattatggt gtagcgtctc ttactactat cctagatatg
841 gtgaaggtga tgacatttgc cttacaggaa ggaaaagtag ctatccattg tcatgcaggg
901 cttggtcgaa caggtgtttt aatagcctgt tacttagttt ttgcaacgag aatgactgac
961 caagcaatta tatttgtgcg ggcaaagcga cccaattcca tacaaaccag aggacagctc
1021 ctctgtgtaa gggaatttac tcagtttcta actcctctcc gcaatatatt ctcttgctgt
1081 gatcccaaag cacatgctgt caccttacct caatatctaa ttcgccagcg tcatctgctt
1141 catggttatg aggcacgact tctgaaacac gtgccaaaaa ttatccacct agtttgcaaa
1201 ttgctgctgg acttagcgga gaacaggcca gtgatgatga aggatgtgtc cgaaggacct
1261 ggtctctctg ctgaaataga aaagacaatg tctgagatgg tcaccatgca gctggataaa
1321 gagttactga ggcatgacag tgatgtgtcc aacccgccta accccactgc agtggcagca
1381 gattttgaca atcgaggcat gattttctcc aatgagcaac agtttgaccc tctttggaaa
1441 aggcggaatg ttgagtgcct tcaacccctg actcatctga aaaggcggct cagctacagt
1501 gactcagatt taaagagggc cgagaacctc ctggagcaag gggagactcc acagacagtg
1561 cctgcccaga tcttggttgg ccacaagccc aggcagcaga agctcataag ccattgttac
1621 atcccacagt ctccagaacc agacttacac aaggaagcct tggttcgcag cacactttct
1681 ttctggagtc agtcaaagtt tggaggcctg gaaggactca aagataatgg gtcaccaatt
1741 ttccatggaa ggatcattcc aaaggaagca cagcagagtg gagctttctc tgcagatgtt
1801 tcaggctcac acagccctgg ggagccagtt tcacccagct ttgcaaatgt ccataaggat
1861 ccaaaccctg ctcaccagca agtgtctcac tgtcagtgta aaactcatgg tgttgggagc
1921 cctggctctg tcaggcagaa cagcaggaca ccccgaagcc ctctggactg tggctccagt
1981 cccaaagcac agttcttggt tgaacatgaa acccaggaca gtaaagatct gtctgaagca
2041 gcttcacact ctgcattaca gtctgaattg agtgctgagg caagaagaat actggcggcc
2101 aaagccctag caaatttaaa tgaatctgta gaaaaggagg aactaaaaag gaagaaagag
2161 cttaattccg gagatggagc ttgggaaaga atatgtggcg agagggaccc tttcatccta
2221 tgcagcttga tgtggtcttg ggtggagcaa ctgaaggagc ctgtaatcac caaagaggat
2281 gtggacatgt tggttgacag gcgagcagat gccgcagaag cacttttttt attagagaag
2341 ggacagcaca gactattctc tgcgtgttgc actgcatagt gaacctgcag acaattcccg
2401 tggatgtgga ggaagctttc cttgcccatg ccattaaggc attcactaag gttaattttg
2461 attctgaaaa tggaccaaca gtttacaaca ccctgaagaa aatatttaag cacacgctgg
2521 aagaaaaaag aaaaatgaca aaagatggcc ctaagcctgg cctctagctt tcactcgtgg
2581 tgaatatttc agacctaaag atccagatag tatctctgtt catatgtgaa taagttgaag
2641 attgtggggc tactttttct catagcactt tattttgaat gttgttagtt tgtgctgaga
2701 atggtcgtcc gtatttgaac caattattta ttttaaaata tatttaagct acatttttgt
2761 tttgaaaaat tgccataaat ttggtgccac tttcttttat ttatttgact gagttaatat
2821 tattgtatta acattttaag tatatggtgt ttacattctt atttcttttg acattttgga
2881 aataatcata acttgtcttt ccaaaataac cattttcttg atggaactct tcctagagtt
2941 tttaccaaat agctaacttt agtagtaaaa cctcattgtg tatccattcc cccacagatg
3001 aactaagaaa gtcaccaagt gtcttaagct gttttatatt tgttacgaag aaggctattg
3061 ctacaatatt tttaaaggtt tcttttttaa ctttgaaatt ttttgttttt ccttttcttt
3121 ttataaatgt aacagagggt ttcaaagcat attatttttc agagagattt agttttactt
3181 taatggagtg actgtgaagt ggttgggatt ttttgcttgt agaaagtaga cttgctcttt
3241 gtcagatttc caaacaacct tgccagcctt ggctgtcaaa aggaggcagg agcagttctc
3301 aacacaccaa gccttattcc cactcccttg ggttgctgct gagccaaata gcatctttac
3361 agaggaagtg ggatcagagg caggaagtgt ggaaagttgc taagaagcag ggcttgcctc
3421 tgtcctcccg gggactacac agggatattc gtgcagggca ggggctctgt gccagccctg
3481 ctctctcaga tgccacagcc actctgcaga ggtgactctt ggagctggag gaagtcaaaa
3541 ctgggccact gtttgtactg atggtgtatt agcatgagca gcgtggccct ggccccacac
3601 tcccaaatct gccactccat agacccactt gcctcaaggc tttatatttg gctgctttct
3661 tacaatgaga attaagattt ttaaactgaa gttgaccata caggttgcat tagccctaac
3721 tggcttcatg taagaagggt gactgcctaa actagttcct tgtaagctga accatcaatt
3781 atcagttgaa gccatacttt tatttaaatt aatatacgta gataccagag gccaagccac
3841 agagaggata atagttcttc ccaataaagg tgatattaat cagactaatt tcgaactaaa
3901 gaagttactg cttaaagacg gaatttcagg ggaagcaaga ctcatttaga acaaatgaaa
3961 tttctccagt cctacatttc tgaattgact tctagcacat caaaaatatt tcagtcatta
4021 tcagtctcat taactgaaat gccaaatgct aaatgcagtg ttctttcaca ctgttttaat
4081 tttcttggga aattgagtcc agtggatgtt aatggagtgg gttgcccatc cctgaaatgt
4141 cttattttca agtgcctggc ctgggaaaga aggggaagaa acaattgcat tatatccaaa
4201 gatacactat aaaaatagag tttttaccaa aaaaagatgt ttgttctcat ctcagtaggc
4261 ctcatttggg caagtgaccc acaggtcttt tggcgagttt gctatttgcc tgttgaaata
4321 cttgtttcaa cttagagaac agttatgatg tgaccatagc atggcacaac taaaaatcta
4381 agcctgaaac ctgaaaaaag agatatgaca agggaaatta atcaggctat acataagtat
4441 tgtatttatt tgaataaaaa taaaaagagc aacccataaa aaaaaaaaaa aaaaaaaaga
4501 aaaaaaaaaa aaaaa
//