LOCUS BC051379 1018 bp mRNA linear HUM 29-JUL-2008
DEFINITION Homo sapiens family with sequence similarity 178, member B, mRNA
(cDNA clone IMAGE:5441067), complete cds.
ACCESSION BC051379
VERSION BC051379.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1018)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1018)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Mark Watson
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: d Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31745175
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1018
/db_xref="H-InvDB:HIT000099343"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5441067"
/tissue_type="Spleen"
/clone_lib="NIH_MGC_113"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1018
/gene="FAM178B"
/db_xref="GeneID:51252"
/db_xref="HGNC:HGNC:28036"
CDS 251..610
/gene="FAM178B"
/codon_start=1
/product="family with sequence similarity 178, member B"
/protein_id="AAH51379.1"
/db_xref="GeneID:51252"
/db_xref="HGNC:HGNC:28036"
/translation="MRPSSLRQYLDSVPLPPCQEQQPKASAELDHKACYLCHSLLMLA
GVVVSCQDITPDQWGELQLLCMQLDRHISTQIRESPQAMHRTMLKDLATQTYIRWQEL
LTHCQPQAQYFSPWKDI"
BASE COUNT 220 a 336 c 270 g 192 t
ORIGIN
1 cacaggggtt tagaattgac tggtgtagga gcagaggacc tggggctgga tctgggcaca
61 gcaatttgca gggcactgct gggcaggagt ccctgatggc caagctgctg ggctctgtat
121 ctcccgcaag ctgcagcgga ggccccatgg agcaggagca gaagcacacg ttggagaact
181 gaacttgaag gacaggactt acagcattga ggtcacacag ctgtcctcgc tcagccggct
241 cctgggcctt atgaggccat catctctcag gcaatacctg gactctgtgc ccttgccacc
301 ctgccaggag caacagccaa aggctagtgc cgagctagac cacaaggcct gctacctgtg
361 ccacagcttg ctgatgctgg ccggggtagt tgttagctgc caggacatca ctccagacca
421 gtggggcgag ctgcagctgc tgtgcatgca gttggaccgc cacatcagca cgcagatccg
481 ggagagcccc caggccatgc accgcaccat gctcaaggac ctggctaccc agacctacat
541 ccgttggcag gagctgctga cccactgcca gccccaggcc cagtatttca gcccctggaa
601 agacatctaa agggacaggg tcagggcagc ctagggctcc tggcttcagc aggaagtgaa
661 caggctcagg gaactggagg aagcgaagca tcaaggccag aggaggccac atgctgacca
721 gcctgatgag gcaagagcct gcccctgcca ccgccccgac ccctctcctc tctgcaagag
781 cctgcctctg ccaccgcccc gaccccctct cctctcagca agggatgggc ctctctgcct
841 cgcccacccc tcagccctcc tcccagccat ctcctcttcc ctaaggcctc tgtctccata
901 gctctggttt ccctgggcct cagtcctccc caccctcctt cctctgtctc cctgtcacta
961 atgtgaggtt tctttgtgca cattaaagtc ttctttcagc aaaaaaaaaa aaaaaaaa
//