LOCUS BC051353 2982 bp mRNA linear HUM 10-MAY-2004
DEFINITION Homo sapiens LSM11, U7 small nuclear RNA associated, mRNA (cDNA
clone IMAGE:6584604), partial cds.
ACCESSION BC051353
VERSION BC051353.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2982)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2982)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: o Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..2982
/db_xref="H-InvDB:HIT000099327"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6584604"
/tissue_type="Ovary, teratocarcinoma"
/clone_lib="NIH_MGC_109"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2982
/gene="LSM11"
/gene_synonym="FLJ38273"
/db_xref="GeneID:134353"
CDS <1..1062
/gene="LSM11"
/gene_synonym="FLJ38273"
/codon_start=1
/product="LSM11 protein"
/protein_id="AAH51353.1"
/db_xref="GeneID:134353"
/translation="ARSAGAGSPARPPSPRLDVSSDSFDPLLALYAPRLPPIPYPNAP
CFNNVAEYESFLRTGVRGGGRGRGRARGAAAGSGVPAAPGPSGRTRRRPDAPAPDPER
IQRLRRLMVAKEEGDGAAGAGRRGPGRSRKAPRNVLTRMPLHEGSPLGELHRCIREGV
KVNVHIRTFKGLRGVCTGFLVAFDKFWNMALTDVDETYRKPVLGKAYERDSSLTLTRL
FDRLKLQDSSKKEADSKSAVEDSTLSRYSQTSTWKLASVWGRADTGRGSHKRSRSVPS
SLQASAREESRSELSGRTTRTDGSSVGGTFSRATTLSRGQSRKKKRKPKVDYQQVFTR
HINQIFIRGENVLLVHLAQ"
BASE COUNT 744 a 722 c 784 g 732 t
ORIGIN
1 gcgaggtcgg ctggcgccgg gagccccgcg cgcccgccca gcccgcggct ggatgtcagc
61 tctgacagct tcgacccgct gctggccctg tacgcgcccc gcctgcctcc cattccctac
121 cccaatgccc cctgcttcaa caacgtggcg gagtacgaga gcttcctcag gaccggagtc
181 cggggcggcg ggcgcgggcg cgggcgggct cggggcgcgg ccgcgggctc tggggttccc
241 gccgcacccg ggccctcggg caggactcgt cgccgcccgg acgcgcccgc cccggacccc
301 gagcgcatcc agcgcctccg ccgtctcatg gtggccaaag aggaagggga cggggccgca
361 ggagcgggcc ggaggggtcc gggtcggagc aggaaggcgc cacgcaacgt gctcacgcga
421 atgcccttgc acgaaggcag ccctctgggt gaactccatc gctgtatccg tgagggggtg
481 aaggtgaatg ttcacatccg cactttcaag ggacttcggg gcgtctgtac aggcttcctt
541 gttgcattcg acaagttctg gaatatggca cttactgatg tggatgagac ctaccgaaaa
601 cctgtcctag gcaaagcata tgaacgggat tcttcactga ctctcactag gctatttgat
661 cggctgaaac ttcaagattc ctccaagaag gaagcagatt ctaagtctgc agttgaagat
721 tccactctgt ctagatactc acagacatcc acttggaagt tggcttcagt gtggggaaga
781 gcagacactg gccggggctc acacaagcgt tcccgctctg tcccttcttc cctgcaggcc
841 tctgcaaggg aggagtccag gtcagagctg tcagggagga ctacacggac agacggctcc
901 agtgtgggag gtaccttttc cagggctacc accctttcca gaggccagtc ccgtaagaaa
961 aagcgaaagc ccaaagtgga ttaccagcag gtattcactc gacacataaa tcagattttc
1021 attcgaggcg agaatgtcct gctggttcat cttgcacagt gaccagctca gcctgagctt
1081 tggtttttag aaataaagtg catgaattgc tgctatgctg tatcctagta tcccagtgaa
1141 actctgagtt ggaatgattc cctctggtcc tgcatatgca gaggacggag caggctcagc
1201 cccctggaag atgagctcaa ggggaggaca ggccttggga gggcaggcgt ttgcattaat
1261 atcaaggcaa aaagcattca tagatacatg catctgattt ggtattgtga tttacttcag
1321 accctgaaac caaatatctg atcttccatt agacttaggg gtcatgatat gagtggaatt
1381 tacattttag atactatagg ggaaagaaaa gtctcaaaaa gaagtattgc atgtctaaaa
1441 gctagtgccc tgagtactca tgaattcgat tccaagagta gtggtgtaaa ttgccttgga
1501 gccctgcatc cacgtcttgt aactaacttt tgaattttgc ctgacatgat tctctcttga
1561 tgaagaaatg acatatatta tctttgaata tctacaagga aagttaccaa cttatgtagg
1621 ggtgaaattt ggataggcgg tatgctcaaa gcagccagca atgagtgctc tgttttgatc
1681 cttcttctta ttatggaaag gagtacagga cctcttcagt cttcccctta ccagaggtag
1741 cctctgcaaa tggcatacca gatgggactc taagatgctt gtgtggtggc ttcttgtcct
1801 tctctttgac ttctgtggca tggtgctagt gcatgtaccc tgtggtattg cccctctgtc
1861 cgtagtgtga actgtcctgt gagctttatg tcaggagact gtgaccttca tgtccagctt
1921 caaagagttg tgcatgaact cggtaataca catcacacgg ctgagagtcc cctttccagg
1981 cagggccagc atgtgtagaa tatctttcag aatatggttt caccatgaaa caggggtggt
2041 agatttattc ccttgtgtca ggccaaagaa gttcttacaa agtacagtgg gtagtgtcta
2101 aagcgacact ttactcacag cctggcttga gtcaacagga acaccatagc acccacaaat
2161 acttctactt gaatcatatt ctgtgctttt tcaatcacta gtgcagaata ggctgcattt
2221 gacacagact gttaggcaat attgattttt ttgttttgtt tttatttggt tttatctgag
2281 ataacttatg ttcaaggtga gaataagaaa tagccaacta gttaaaatgt atgaaaagaa
2341 aactttcccc tgctgtattt gttgtgtaac ataaataagc cttctgagaa gcagggtgaa
2401 taaagtttag ggagctggga cacctggtcc tgctagctgg accactggct catcatgcaa
2461 tgaaaaggtg agcagactta acccctccgt gcctcagctt tttccccaca gacacctacc
2521 tcacaggggc attgagaaaa aaaaaatgaa ggcattttac agtctctaaa catctttaag
2581 tgccatgagt aatttttcct gactctgttt catagctttg taagaattct gtgtctttat
2641 aagacacaga agcaaggcag gtgctacata aaaaagtaat ctcagccagg cacggtggct
2701 cgcgcctgta atcccagcac tttgggaggc tgaggcgggt ggatcacagg gtcaggagat
2761 caagaccatc ctggctaaca cggtgaagcc ctgtctctac taaaaataca aaagttagcc
2821 gggcgtggtg gcgggcgcct gtagtcccag ctacgtgggt ggctgaggca ggagaatggg
2881 gtgaacccgg gaggcggagc ttgcagtgag ccaagattgc accactgtac tccagcctgg
2941 gcgacagagc aagactctgt ctcaaaaaaa aaaaaaaaaa aa
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