LOCUS BC051323 3513 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 488, mRNA (cDNA clone MGC:59976
IMAGE:6252494), complete cds.
ACCESSION BC051323
VERSION BC051323.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3513)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3513)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: g Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255102.
FEATURES Location/Qualifiers
source 1..3513
/db_xref="H-InvDB:HIT000053624"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59976 IMAGE:6252494"
/tissue_type="Pancreas, ductal carcinoma"
/clone_lib="NIH_MGC_110"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3513
/gene="ZNF488"
/gene_synonym="FLJ32104"
/db_xref="GeneID:118738"
/db_xref="HGNC:HGNC:23535"
CDS 163..1185
/gene="ZNF488"
/gene_synonym="FLJ32104"
/codon_start=1
/product="zinc finger protein 488"
/protein_id="AAH51323.1"
/db_xref="GeneID:118738"
/db_xref="HGNC:HGNC:23535"
/translation="MPEWPPCLSVAPALVITMAAGKGAPLSPSAENRWRLSEPELGRG
CKPVLLEKTNRLGPEAAVGRAGRDVGSAELALLVAPGKPRPGKPLPPKTRGEQRQSAF
TELPRMKDRQVDAQAQEREHDDPTGQPGAPQLTQNIPRGPAGSKVFSVWPSGARSEQR
SAFSKPTKRPAERPELTSVFPAGESADALGELSGLLNTTDLACWGRLSTPKLLVGDLW
NLQALPQNAPLCSTFLGAPTLWLEHTQAQVPPPSSSSTTSWALLPPTLTSLGLSTQNW
CAKCNLSFRLTSDLVFHMRSHHKKEHAGPDPHSQKRREEALACPVCQEHFRERHHLSR
HMTSHS"
BASE COUNT 784 a 1012 c 895 g 822 t
ORIGIN
1 ggaggaggct gtgctgcacc agcacctctt gctccacatc tccagagagc ccagggccct
61 gtggccgagt gtgtccagcc cagtgtcatg gggagcttcc atatctcatg gctccttgct
121 gggccaagcc ctccagaacc ccaaaccccc aaagactgat gaatgccaga gtggccacct
181 tgcttatctg tggccccggc cctggtgatc accatggcag ctgggaaggg agccccgttg
241 agcccatcgg ctgaaaacag atggcgactt agcgaacctg agctgggccg gggctgcaag
301 ccagtgctgc tcgagaagac gaaccgcctg ggccctgagg ctgctgtggg cagggcgggc
361 cgggatgtgg gcagtgcgga gctggcactg ttggtagccc caggcaagcc ccgacctggc
421 aagccgctgc ccccgaagac acgtggagag cagaggcaga gcgccttcac ggagctgccg
481 aggatgaagg accggcaggt ggatgctcag gcccaggaga gggagcacga tgaccccaca
541 ggccaacctg gtgccccaca gctgacccag aacatcccca gaggcccagc tggcagcaaa
601 gtcttctctg tgtggcccag cggagcacga agtgagcaaa gaagcgcctt tagcaaacca
661 accaagcgac cagcagagag gcctgagcta acctcagtct tccctgcagg ggaatctgca
721 gatgccctgg gggagctgtc tggactcctc aacactacag acctcgcttg ttggggtcga
781 ctttcaactc ccaagctttt ggttggtgat ttgtggaact tgcaagcatt gccacagaat
841 gctccactct gtagcacttt tctgggtgcc cctacactgt ggctggagca tacccaggcc
901 caggtgcccc caccctcatc atcctccacc acttcgtggg ccctcctgcc acccaccctc
961 acctccctgg gcttgtccac ccagaactgg tgtgcaaagt gcaacctgtc ctttcgccta
1021 acgtccgacc tggtctttca catgcgatcc caccacaaaa aggagcatgc ggggcctgac
1081 ccacattctc agaagcggag agaagaggcc cttgcctgcc ctgtgtgcca ggagcacttc
1141 cgggagcgcc accacctctc ccggcacatg acttctcaca gctagcaggt gaccgcagaa
1201 tgacctgctg ggtgcagcag ccagcctttg gcagaggggg gctccctggg cctgcgttga
1261 gggggctgtc atggtccttt gcagagctgc tgcttttggc attcatagat aaacagctca
1321 ggcataattt gaaaaagcca cacctgcatg atgtgttttg aaggaaatga agtcctgaaa
1381 taaagtgatg ggctttgcaa atccagggta gaggccctaa caggcacaga gagcaggggc
1441 aactcctggc acacatcatg ggctttggag gcacacaagc ctggattcga atctgggctc
1501 tttcacatac tagctgtgac cctggacaaa gagctttaac ctgctgagtc cccattttct
1561 catctgtgaa atggagatga taacactgtg tcttaggttg gcattcaggt cacatgaaag
1621 gtgtgtggaa agtggccagc attctgcctg cagaccctga gcactgagtc aacaaggttt
1681 gtgatgatgt ctgtactagt tagctattgt tattaacaag atctccatgg cagacaagct
1741 aaagcatctg cctaagtcgt gagtctgtgg gttggctcag gttaagctga gcttggctgg
1801 gcttggcagc aagtctcaga tttgatcaag tcatattcgt tttcttcttc ggctggtggg
1861 ctacccagag cgagcacgct tctctcgtgg tcatgccaag aacacaggag ggtgagtcta
1921 acaagcacac ctcaagcctc tgcttgggtc acattgccaa tgtcctctca gcccatacaa
1981 gtggcaggac caggcccaat attaaggagt ggaaaagtgt aggctgccct tggtgaagct
2041 gtgacaaggg agtgaccatc catcccctcc acaggagggt gaggaattgg gacaggtaat
2101 tccagccaat acctggtcca tagttcttca cattgtgagt atatgaatac ggggaaatag
2161 aaccccctcc ccaccaccta cacacatgct gttttacctt ccaagaatag gacatgtgca
2221 aaaactaggc ttccagatcg tgaggctggg gagcattcta ggtaccattt attatctact
2281 gcgtttcggt cagtagctgt tgtaggtacc cgcatcagcc cttgttccta aggatgtgtg
2341 gagcccaggc tgtactcttt gacattccac aggtcagtct gcgtgaaagc cctttgtggg
2401 gagtttccaa gccagtgtcg tttttgcact ggtttccacc tcactgtcag atattgttct
2461 tttgatatgc agtttccagc cctccaatga gtccccagca cagatctcag gcttgtggct
2521 gggaataagc ccagctgagc aggtggggat ctcagccagc ctcccagact gcacctcttc
2581 tattgctctc ctctgtccac cgttccaggc agcagcactc ccacctggct gctctgatgt
2641 cctcgctccc tccattcctg cctctcacca tgcacgcatc cattgtccac acacacacaa
2701 ccagataatc ttctgaaagt gtaactcaga tgatgcctcc aaccctgtgg ctgcccttca
2761 cacttacagg cctaacccca gcaggacctg ccagctgctt catgaacaag tccctgcctc
2821 atgttaattg caagcactca tttcactctc cctgtgtgcc aggcaatagc ataagcactg
2881 gaagaataca gatgttatag tgagtcctac aatagccctg gaaggcaaga gctgtttcct
2941 ttccatttct acaatgagtc aattgcagat gatgctataa cacttccagt gtttctgaca
3001 cttccctgaa gctatacctg ctaccttcat gggccgagct tgcccttatg aggcccacag
3061 gtggcagtgg gcagagggga ccccgctata ccacctcgct gctgttccac tgtctgctcc
3121 cgtgttctga ccacagctct ggtgccgttt ctcaagcctg ggcttcattc aacattttct
3181 atctagctct tcatggtgct gctcctgcta tggttccaca gggcttcttc tcgcaggtca
3241 gctccttaga gaggtctccc agattccccg taaagcagcc ctgcagcctc tgcctctctc
3301 agccgcatca ccctgttgct tccttcacag catgtctcac catctgcaac catctttctg
3361 tttgtcgtct tgttgatttg ctgcctccac actgtcagct ccttgggaac agagattggt
3421 ttgtttactg tgcatccctg gtgcccagaa cagggcatgg catattgttg gtgcataata
3481 aatattgtgg aaataaaaaa aaaaaaaaaa aaa
//