LOCUS BC051307 2682 bp mRNA linear HUM 30-DEC-2006 DEFINITION Homo sapiens synapsin II, mRNA (cDNA clone MGC:59674 IMAGE:5802100), complete cds. ACCESSION BC051307 VERSION BC051307.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2682) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2682) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: e Column: 10. FEATURES Location/Qualifiers source 1..2682 /db_xref="H-InvDB:HIT000053617" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:59674 IMAGE:5802100" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_47" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2682 /gene="SYN2" /gene_synonym="SYNII" /gene_synonym="SYNIIa" /gene_synonym="SYNIIb" /db_xref="GeneID:6854" /db_xref="HGNC:HGNC:11495" /db_xref="MIM:600755" CDS 151..1899 /gene="SYN2" /gene_synonym="SYNII" /gene_synonym="SYNIIa" /gene_synonym="SYNIIb" /codon_start=1 /product="synapsin II" /protein_id="AAH51307.1" /db_xref="GeneID:6854" /db_xref="HGNC:HGNC:11495" /db_xref="MIM:600755" /translation="MMNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGA ASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDA PAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGT YAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLES IYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSG MGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGN WKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSM PLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPP QRPPPQGGPGQPQGMQPPGKVLPPRRLPPGPSLPPSSSSSSSSSSSAPQRPGGPTAHG DAPSSSSSLAEAQPPLAAPPQKPQPHPQLNKSQSLTNAFSFSESSFFRSSANEDEAKA ETIRSLRKSFASLFSD" BASE COUNT 592 a 856 c 682 g 552 t ORIGIN 1 gtctgcgggg tctggcgccg gggtctgagt ctctgctggc taagccgccg cctcagccgc 61 ctcagtcgcc tcaatctcgc cttccgccct cgctctccct ccgcgccacc agaccccgta 121 gccccgcgcg cccccagccc tttaagccag atgatgaact tcctgcggcg ccggctgtcg 181 gacagcagct tcatcgccaa cctgcccaac ggctacatga ccgacctgca gcggcccgag 241 ccccagcagc cgccgccgcc gccgcccccc ggtccgggcg ccgcctcggc ctcggcggcg 301 cccccgaccg cctcgccggg cccggagcgg aggccgccgc ccgcctcggc gcccgcgccg 361 cagcccgcgc cgacgccgtc ggtgggcagc agcttcttca gctcgctgtc ccaagccgtg 421 aagcagacgg ccgcctcggc tggcctggtg gacgcgcccg ctcccgcgcc cgcagccgcc 481 aggaaggcca aggtgctgct ggtggtcgac gagccgcacg ccgactgggc caagtgcttt 541 cggggcaaaa aagtccttgg agattatgat atcaaggtgg aacaggcaga attttcagag 601 ctcaacctgg tggcccatgc agatggcacc tatgctgtgg atatgcaggt tctccggaat 661 ggcacaaagg ttgtccggtc cttccggcca gacttcgtgc tcatccggca gcatgcattt 721 ggcatggcgg agaatgagga cttccgccac ctgatcattg gtatgcagta tgcaggcctc 781 cccagcatca actcactgga atccatatac aacttctgtg acaagccatg ggtgtttgcc 841 cagctggtcg ctatctataa gacactggga ggagaaaagt tccctctcat tgaacagaca 901 tactacccca accacaaaga gatgctgaca ctgcccacgt tccctgtggt ggtgaagatt 961 ggccacgctc actcaggcat gggcaaggtc aaagtggaaa accactacga cttccaggac 1021 attgccagcg tggtggctct cacccagacc tatgccactg cagagccttt cattgactcc 1081 aagtatgaca tccgggtcca gaagattggc aacaactaca aggcttacat gaggacatcg 1141 atctcaggga actggaagac gaacactggc tctgcgatgc tggagcagat tgccatgtca 1201 gacaggtaca aactgtgggt ggacacctgc tctgagatgt ttggcggcct ggacatctgt 1261 gctgtcaaag ctgtacatgg caaagatggg aaagactaca tttttgaggt catggactgt 1321 agcatgccac tgattgggga acatcaggtg gaggacaggc aactcatcac cgaactagtc 1381 atcagcaaga tgaaccagct gctgtccagg actcctgccc tgtctcctca gagaccccta 1441 acaacccagc agccacagag cggaacactt aaggatccgg actcaagcaa gaccccacct 1501 cagcggccac cccctcaagg gggccctggg caaccccaag gaatgcagcc cccaggcaag 1561 gtgctgcctc cacgccggct cccccctgga ccatcactgc caccttcctc ctcttcctcc 1621 tcttcttcct cctcctcggc tcctcagcgg ccgggcggcc ccaccgccca cggagatgca 1681 ccctccagca gcagctccct ggcagaggcc cagccacccc tggctgctcc accacagaag 1741 ccccagcctc acccacagct caacaagtcg cagtccctga caaatgcctt cagcttctct 1801 gagtcctcct tcttccggtc ttcagccaat gaggatgaag ccaaagcgga gaccatccgg 1861 agcttgagga agtcctttgc cagcctcttt tcagattagc tcttcagaca cacggggcac 1921 ccagcccaac cgggaaaggc atctaagaca ttcaccaaca acagtcagcc agcttggtgg 1981 tgatgtccca tgaccttgac gtgtgtggtc ccttcctctg ctctgttgta ctaagtgatg 2041 ttgtgcagcc cagaaaggac catttgacag tctcagggca ggtgcctacc cagcaagggg 2101 tacctggcat cagagaggaa agagctgctt ccctgtagtc atgagagctt ccttctgaag 2161 tcatcgttcg ctgtgagttt agtggcctta ttgtgacagt gccatcatgt cttattcttc 2221 cctgtgaaac caggattaat cgtggactcc tggcagctta acctagctca gttgcagtgc 2281 taagcatgcc ccgcccccat tcagtgatac ctgtttggga agtatatact tccccaaaag 2341 tactcttggc cctaagtttt aggaactttc cccgacctgg atcccttgtc atacctgtgt 2401 tactgtttaa agcacaccca cccaacttac aagatcttag gctgctgtgg tggtgaagca 2461 ccttgagtct gctgatattc gggagaacaa ggatctgcag tttccccttt tctcccctct 2521 gaagagtggt tcttatgtgc aatctgcagt aaccttgaac tccagagctg cactatagag 2581 gagaatgcat gccactatga cagcagtatg ccaagctttg tgttcatctc ctaataaacg 2641 ttaagacctt tggtgtaata aaaaaaaaaa aaaaaaaaaa aa //