LOCUS BC051297 1566 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens tubulin, alpha 1c, mRNA (cDNA clone MGC:59688
IMAGE:3832363), complete cds.
ACCESSION BC051297
VERSION BC051297.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1566)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1566)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 47 Row: a Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31880337.
FEATURES Location/Qualifiers
source 1..1566
/db_xref="H-InvDB:HIT000053611"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:59688 IMAGE:3832363"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1566
/gene="TUBA1C"
/gene_synonym="bcm948"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
CDS 77..1426
/gene="TUBA1C"
/gene_synonym="bcm948"
/codon_start=1
/product="tubulin, alpha 1c"
/protein_id="AAH51297.1"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
/translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG
GDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANN
YARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD
YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
IERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVI
SAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAT
IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLD
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADGEDEGEEY"
BASE COUNT 370 a 416 c 388 g 392 t
ORIGIN
1 gtagtctgtt agtgggagat ccttgttgcc gtcccttcgc ctccttcacc gccgcagacc
61 ccttcaagtt ctagtcatgc gtgagtgcat ctccatccac gttggccagg ctggtgtcca
121 gattggcaat gcctgctggg agctctactg cctggaacac ggcatccagc ccgatggcca
181 gatgccaagt gacaagacca ttgggggagg agatgattcc ttcaacacct tcttcagtga
241 aacgggtgct ggcaagcatg tgccccgggc agtgtttgta gacttggaac ccacagtcat
301 tgatgaagtt cgcactggca cttaccgcca gctcttccac cctgagcaac tcatcacagg
361 caaggaagat gctgccaata actatgcccg agggcactac accattggca aggagatcat
421 tgacctcgtg ttggaccgaa ttcgcaagct ggctgaccag tgcaccggtc ttcagggctt
481 cttggttttc cacagctttg gtgggggaac tggttctggg ttcacctcgc tgctcatgga
541 acgtctctca gttgattatg gcaagaagtc caagctggag ttctccattt acccggcgcc
601 ccaggtttcc acagctgtag ttgagcccta caactccatc ctcaccaccc acaccaccct
661 ggagcactct gattgtgcct tcatggtaga caatgaggcc atctatgaca tctgtcgtag
721 aaacctcgat atcgagcgcc caacctacac taaccttaac cgccttatta gccagattgt
781 gtcctccatc actgcttccc tgagatttga tggagccctg aatgttgacc tgacagaatt
841 ccagaccaac ctggtgccct acccccgcat ccacttccct ctggccacat atgcccctgt
901 catctctgct gagaaagcct accacgaaca gcttactgta gcagagatca ccaatgcttg
961 ctttgagcca gccaaccaga tggtgaaatg tgaccctcgc catggtaaat acatggcttg
1021 ctgcctgtta taccgtggtg acgtggttcc caaagatgtc aatgctgcca ttgccaccat
1081 caaaaccaag cgtaccatcc agtttgtgga ttggtgcccc actggcttca aggttggcat
1141 taattaccag cctcccactg tggtgcctgg cggagacctg gccaaggtac agagagctgt
1201 gtgcatgctg agcaatacca cagctgttgc cgaggcctgg gctcgcctgg accacaagtt
1261 tgacctgatg tatgccaagc gtgcctttgt tcactggtac gtgggtgagg ggatggagga
1321 aggcgagttt tcagaggccc gtgaggacat ggctgccctt gagaaggatt atgaggaggt
1381 tggagcagat agtgctgacg gagaggatga gggtgaagag tattaacctg tgtgctgtac
1441 ttttacactc ctttgtcttg gaactgtctt atttttgttc tgtaaatgtc tattgccgta
1501 aattgttaat aaaattgatg tttccatttt aaatgtcaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaa
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