LOCUS       BC051287                3811 bp    mRNA    linear   HTC 27-OCT-2008
DEFINITION  Homo sapiens protocadherin 1, mRNA (cDNA clone IMAGE:6646310),
            containing frame-shift errors.
ACCESSION   BC051287
VERSION     BC051287.1
KEYWORDS    HTC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3811)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3811)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (25-APR-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 47 Row: o Column: 21
            This clone has the following problem: frame shifted.
FEATURES             Location/Qualifiers
     source          1..3811
                     /db_xref="H-InvDB:HIT000099297"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:6646310"
                     /tissue_type="Ovary, teratocarcinoma"
                     /clone_lib="NIH_MGC_109"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
BASE COUNT          849 a         1140 c         1106 g          716 t
ORIGIN      
        1 gcggcgcgga cgcaaagccg ccgggctgct gcgcccagag ccagccggag ccggagccgg
       61 agcccgaact gcagctccag ccccagccgt gcggagccgc agcccaggcc ggggccggcg
      121 gcggctcatg gacagcgggg cgggcggccg gcgctgcccg gaggcggccc tcctgattct
      181 ggggcctccc aggatggagc acctgaggca cagcccaggc cctggggggc aacggctact
      241 gctgccctcc atgctgctag cactgctgct cctgctggct ccatccccag gccacgccac
      301 tcgggtagtg tacaaggtgc cggaggaaca gccacccaac accctcattg ggagcctcgc
      361 agccgactat ggttttccag atgtggggca cctgtacaag ctagaggtgg gtgccccgta
      421 ccttcgcgtg gatggcaaga caggtgacat tttcaccacc gagacctcca tcgaccgtga
      481 ggggctccgt gaatgccaga accagctccc tggtgatccc tgcatcctgg agtttgaggt
      541 atctatcaca gacctcgtgc agaatggcag cccccggctg ctagagggcc agatagaagt
      601 acaagacatc aatgacaaca cacccaactt cgcctcacca gtcatcactc tggccatccc
      661 tgagaacacc aacatcggct cactcttccc catcccgctg gcttcagacc gtgatgctgg
      721 tcccaacggt gtggcatcct atgagctgca ggctgggcct gaggcccagg agctatttgg
      781 gctgcaggtg gcagaggacc aggaggagaa gcaaccacag ctcattgtga tgggcaacct
      841 ggaccgtgag cgctgggact cctatgacct caccatcaag gtgcaggatg gcggcagccc
      901 cccacgcgcc agcagtgccc tgctgcgtgt caccgtgctt gacaccaatg acaacgcccc
      961 caagtttgag cggccctcct atgaggccga actatctgag aatagcccca taggccactc
     1021 ggtcatccag gtgaaggcca atgactcaga ccaaggtgcc aatgcagaaa tcgaatacac
     1081 attccaccag gcgcccgaag ttgtgaggcg tcttcttcga ctggacttat cactgttcag
     1141 ggcccggtgg accgtgagga cctaagcacc ctgcgcttct cagtgcttgc taaggaccga
     1201 ggcaccaacc ccaagagtgc ccgtgcccag gtggttgtga ccgtgaagga catgaatgac
     1261 aatgccccca ccattgagat ccggggcata gggctagtga ctcatcaaga tgggatggct
     1321 aacatctcag aggatgtggc agaggagaca gctgtggccc tggtgcaggt gtctgaccga
     1381 gatgagggag agaatgcagc tgtcacctgt gtggtggcag gtgatgtgcc cttccagctg
     1441 cgccaggcca gtgagacagg cagtgacagc aagaagaagt atttcctgca gactaccacc
     1501 ccgctagact acgagaaggt caaagactac accattgaga ttgtggctgt ggactctggc
     1561 aaccccccac tctccagcac taactccctc aaggtgcagg tggtggacgt caatgacaac
     1621 gcacctgtct tcactcagag tgtcactgag gtcaccttcc cggaaaacaa caagcctggt
     1681 gaagtgattg ctgagatcac tgccagtgat gctgactctg gctctaatgc tgagctggtt
     1741 tactctctgg agcctgagcc ggctgctaag ggcctcttca ccatctcacc cgagactgga
     1801 gagatccagg tgaagacatc tctggatcgg gaacagcggg agagctatga gttgaaggtg
     1861 gtggcagctg accggggcag tcctagcctc cagggcacag ccactgtcct tgtcaatgtg
     1921 ctggactgca atgacaatga ccccaaattt atgctgagtg gctacaactt ctcagtgatg
     1981 gagaacatgc cagcactgag tccagtgggc atggtgactg tcattgatgg agacaagggg
     2041 gagaatgccc aggtgcagct ctcagtggag caggacaacg gtgactttgt tatccagaat
     2101 ggcacaggca ccatcctatc cagcctgagc tttgatcgag agcaacaaag cacctacacc
     2161 ttccagctga aggcagtgga tggtggcgtc ccacctcgct cagcttacgt tggtgtcacc
     2221 atcaatgtgc tggacgagaa tgacaacgca ccctatatca ctgccccttc taacacctct
     2281 cacaagctgc tgacccccca gacacgtctt ggtgagacgg tcagccaggt ggcagccgag
     2341 gactttgact ctggtgtcaa tgccgagctg atctacagca ttgcaggtgg caacccttat
     2401 ggactcttcc agattgggtc acattcaggt gccatcaccc tggagaagga gattgagcgg
     2461 cgccaccatg ggctacaccg cctggtggtg aaggtcagtg accgcggcaa gcccccacgc
     2521 tatggcacag ccttggtcca tctttatgtc aatgagactc tggccaaccg cacgctgctg
     2581 gagaccctcc tgggccacag cctggacacg ccgctggata ttgacattgc tggggatcca
     2641 gaatatgagc gctccaagca gcgtggcaac attctctttg gtgtggtggc tggtgtggtg
     2701 gccgtggcct tgctcatcgc cctggcggtt cttgtgcgct actgcagaca gcgggaggcc
     2761 aaaagtggtt accaggctgg taagaaggag accaaggacc tgtatgcccc caagcccagt
     2821 ggcaaggcct ccaagggaaa caaaagcaaa ggcaagaaga gcaagtcccc aaagcccgtg
     2881 aagccagtgg aggacgagga tgaggccggg ctgcagaagt ccctcaagtt caacctgatg
     2941 agcgatgccc ctggggacag tccccgcatc cacctgcccc tcaactaccc accaggcagc
     3001 cctgacctgg gccgccacta tcgctctaac tccccactgc cttccatcca gctgcagccc
     3061 cagtcaccct cagcctccaa gaagcaccag gtggtacagg acctgccacc tgcaaacaca
     3121 ttcgtgggca ccggggacac cacgtccacg ggctctgagc agtactccga ctacagctac
     3181 cgcaccaacc cccccaaata ccccagcaag caggtaggcc agccctttca gctcagcaca
     3241 ccccagcccc taccccaccc ctaccacgga gccatctgga ccgaggtgtg ggagtgatgg
     3301 agcaggttta ctgtgcctgc ccgtgttggg ggccagcctg agccagcagt gggaggtggg
     3361 gccttagtgc ctcaccgggc acacggatta ggctgagtga agattaaggg agggtgtgct
     3421 ctgtggtctc ctccctgccc tctccccact ggggagagac ctgtgatttg ccaagtccct
     3481 ggaccctgga ccagctactg ggccttatgg gttgggggtg gtaggcaggt gagcgtaagt
     3541 ggggagggaa atgggtaaga agtctactcc aaacctaggt ctctatgtca gaccagacct
     3601 aggtgcttct ctaggaggga aacagggaga cctggggtcc tgtggataac tgagtgggga
     3661 gtctgccagg ggagggcacc ttcccattgt gccttctgtg tgtattgtgc attaacctct
     3721 tcctcaccac taggcttctg gggctgggtc ccacatgccc ttgaccctga caataaagtt
     3781 ctctattttt ggaaaaaaaa aaaaaaaaaa a
//