LOCUS BC051030 4726 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens sema domain, immunoglobulin domain (Ig), transmembrane
domain (TM) and short cytoplasmic domain, (semaphorin) 4G, mRNA
(cDNA clone MGC:51988 IMAGE:5164957), complete cds.
ACCESSION BC051030
VERSION BC051030.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4726)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4726)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: f Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28872813.
FEATURES Location/Qualifiers
source 1..4726
/db_xref="H-InvDB:HIT000259188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51988 IMAGE:5164957"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4726
/gene="SEMA4G"
/gene_synonym="FLJ20590"
/gene_synonym="KIAA1619"
/db_xref="GeneID:57715"
CDS 787..3303
/gene="SEMA4G"
/gene_synonym="FLJ20590"
/gene_synonym="KIAA1619"
/codon_start=1
/product="SEMA4G protein"
/protein_id="AAH51030.1"
/db_xref="GeneID:57715"
/translation="MWGRLWPLLLSILTATAVPGPSLRRPSRELDATPRMTIPYEELS
GTRHFKGQAQNYSTLLLEEASARLLVGARGALFSLSANDIGDGAHKEIHWEASPEMQS
KCHQKGKNNQTECFNHVRFLQRLNSTHLYACGTHAFQPLCAAIDAEAFTLPTSFEEGK
EKCPYDPARGFTGLIIDGGLYTATRYEFRSIPDIRRSRHPHSLRTEETPMHWLNDAEF
VFSVLVRESKASAVGDDDKVYYFFTERATEEGSGSFTQSRSSHRVARVARVCKGDLGG
KKILQKKWTSFLKARLICHIPLYETLRGVCSLDAETSSRTHFYAAFTLSTQWKTLEAS
AICRYDLAEIQAVFAGPYMEYQDGSRRWGRYEGGVPEPRPGSCITDSLRSQGYNSSQD
LPSLVLDFVKLHPLMARPVVPTRGRPLLLKRNIRYTHLTGTPVTTPAGPTYDLLFLGT
ADGWIHKAVVLGSGMHIIEETQVFRESQSVENLVISLLQHSLYVGAPSGVIQLPLSSC
SRYRSCYDCILARDPYCGWDPGTHACAAATTIANRTALIQDIERGNRGCESSRDTGPP
PPLKTRSVLRGDDVLLPCDQPSNLARALWLLNGSMGLSDGQGGYRVGVDGLLVTDAQP
EHSGNYGCYAEENGLRTLLASYSLTVRPATPAPAPKAPATPGAQLAPDVRLLYVLAIA
ALGGLCLILASSLLYVACLREGRRGRRRKYSLGRASRAGGSAVQLQTVSGQCPGEEDE
GDDEGAGGLEGSCLQIIPGEGAPAPPPPPPPPPPAELTNGLVALPSRLRRMNGNSYVL
LRQSNNGVPAGPCSFAEELSRILEKRKHTQLVEQLDESSV"
BASE COUNT 1020 a 1486 c 1252 g 968 t
ORIGIN
1 cgcagctggt gctgtggggc cgcggagccg cgcgtcgctg tctctatggc cccggatccg
61 agcgcaaagg tgagcaaggc gaggagtgcg ggcggcgccc tggcgtgagc ctggggctgc
121 gggccggggg tcgggcaagg cctcccccac gtccattcta ccctccaagc tgggccaggc
181 ctttctcacc accaagtccc ccggtcctgc atgacggctc tagaggggcg cgggccaggc
241 ctcgggctgc gcggggtgca aaccggccac cacggagtcg gggaccagcg cggggagggg
301 gccgcgtggc gaacagtgtt ccccaggatc tgggtcacgt ctcccggcgt ccggcgggat
361 cgaaggagag cttgtcctcg agctgcagca gtagagactg agaaaacgga cctcagaaaa
421 ccaggactag ctctactgtc gggggcaggg tgaccccatc agtaacctac aacccctcta
481 gaacttcaca actccctctc accatggagt ttgcatttga tgcagaaagg catgtgatcc
541 ctccctcctt ctgacctctt agctggggat tccatggcca cacaaccctg tgactccatg
601 tccccccgat tccaggaccc cccatggccc catgattcct tgactcctat gaccttatga
661 cccctgacct tccaagtgac ttccttggac tttgacccct gtgactgtgc ttcccattcc
721 ccgcccccac aacctgtgac tctggctccc tttgggggtc ttgttagtct gggcctcccc
781 aggaagatgt gggggaggct ctggcccctc ctcctcagca tcctcacagc aactgcagtc
841 ccaggaccct cactgcggag accgtctaga gaactagatg ccacccctcg gatgaccata
901 ccctatgaag agctctctgg gacccggcac ttcaagggcc aagcccagaa ctactcaaca
961 ctgctgctgg aggaggcctc agcaaggctg ctggtgggag cccgaggtgc cctgttctct
1021 ctcagtgcca acgacatagg agatggggct cacaaagaga tccactggga agcctcccca
1081 gagatgcaaa gcaaatgtca tcaaaaaggg aaaaacaacc agacggagtg ctttaaccat
1141 gtgcggttcc tgcagcggct caattctacc cacctctatg catgtgggac tcacgccttc
1201 cagcccctct gtgcagccat tgatgctgag gccttcacct tgccaaccag cttcgaggag
1261 gggaaggaga agtgtcctta tgacccagcc cgtggcttca caggcctcat cattgatgga
1321 ggcctctaca cagccactag gtatgaattc cggagcattc ctgacatccg ccggagccgc
1381 cacccacact ccctgagaac tgaggagaca ccaatgcatt ggctcaatga tgcggagttt
1441 gtgttctccg tcctcgtgcg ggagagcaag gccagtgcag tgggtgatga tgacaaggtg
1501 tactacttct tcacggagcg tgccactgag gagggctctg gcagcttcac tcagagccgc
1561 agcagtcacc gtgtggcccg tgtggctcgt gtctgcaagg gagacctggg agggaagaag
1621 atcctgcaga agaagtggac ttccttcctg aaagcccgtc tcatctgcca cattccactg
1681 tatgagacac tgcgtggggt ctgcagcctg gatgctgaaa cctcaagccg tacacacttc
1741 tatgcagcct tcacgctgag cacacagtgg aagaccctgg aggcctcagc catctgccgc
1801 tatgacctgg cagagatcca ggctgtcttt gcaggaccct atatggaata ccaggatggt
1861 tcccggcgct ggggtcgcta tgagggtggg gtgcctgagc cccggcctgg ctcgtgtatc
1921 acagattcat tgcgcagcca aggctacaat tcatcccaag acttgccatc cctggtcctg
1981 gactttgtaa agttgcaccc actgatggct cggcccgttg tgcccacacg tggacggccc
2041 ctgctgctca agcgcaacat acgctacaca caccttacag ggacacctgt caccacgcct
2101 gctggaccta cctatgacct gctctttctg ggcacagctg atggctggat ccacaaggcc
2161 gtagtcctgg gctctgggat gcacattatt gaagagacac aagtgttcag ggagtcccag
2221 tctgtggaaa atctagtcat ctctctattg cagcacagcc tctatgtggg ggctcctagc
2281 ggagtcatcc agctaccact ctccagctgc tcccgctacc gatcctgcta tgactgcatc
2341 ttggcccgag acccctactg tggctgggac cctggcaccc atgcctgcgc agcagccacc
2401 accatagcca acaggacagc actgatacag gacatagaga gaggaaatcg aggctgtgag
2461 agcagcaggg atacagggcc accaccacca ctgaagaccc gctctgtgct ccggggtgat
2521 gatgtcctcc tgccctgtga ccagccatcc aacctggccc gggccttgtg gctactcaat
2581 gggagcatgg gcctgagcga tgggcagggt ggctaccgtg tgggcgtgga cgggctgctg
2641 gttacagatg cacagcctga gcacagtggc aactatggct gctatgccga ggaaaatggc
2701 ctccgcaccc tgctggcctc ctatagtctc acagtccggc cagccactcc tgccccagct
2761 ccaaaagccc ctgccacacc tggggcacag ctggcacctg atgtgagact gctctatgtg
2821 ctagccattg ccgcgcttgg tggcctctgc ctcatcctgg cctcctccct cctctatgtg
2881 gcctgtctgc gggaaggcag acgagggcgc cgacggaaat actcactggg tcgggccagc
2941 cgggcaggag gatctgcggt gcaactgcag acagtctcag gccagtgtcc tggagaggaa
3001 gatgagggtg atgatgaggg ggctgggggc ctggagggca gctgtctcca gatcatccct
3061 ggggagggag ccccagcccc accaccccca ccgcccccac cgccaccggc tgagctgacc
3121 aatggcttgg tggcactgcc cagccggctg cggaggatga atggcaatag ctatgtgctt
3181 ctgaggcaga gcaacaatgg agtaccagca gggccctgct ccttcgccga ggaactcagc
3241 cgcatcctgg aaaaaaggaa gcacacgcag ctcgtggagc agctagatga gagctctgtc
3301 tgagcccagc ctcccagaac aaatgctctt ccaagccagc ctatctgtcc caggctgggc
3361 cactgcctcc ctaacacagc caccctccct tcattacccc cactccatac ccttctccca
3421 actttttgat gtccctgtag ggctggccag tcaggcccag ccaaagcccc ctcctcagtc
3481 tccacagacc cacatgtgag cagcccaggc ccatcggtgc tcctcagagg cagggctctg
3541 caggtccata tgggctcaat gtcaccaccc tctgcatggc cctgtgtgct ggatggtcct
3601 gaaaccagac aagacctctg ccagccacct aagccctgcg tacattcaca tgcacacatg
3661 gaagaatgtt tatcggctgg gctgcagtgc ccccaccctc accttctcct ggtgcattct
3721 tgtttcatcc ctgcttctgg acttggggta ccctcccaat tgccacatcc tatctggtcc
3781 tcttccccag ccccatgtgg tgacctcttt gtcaagagct tgggaacggg ccagcctggg
3841 gaggtaagac tgcatcactc ccctcctctc ccttcctgtg tggcccttgt gaatcagcct
3901 ccccactctc cttggtcatt ctcaagagta tgagagacag agctccaggc atgtcccatc
3961 cccatgcaca tgtggtaaca cacacctgta tcacacatgt gcttacattt ccactcacat
4021 gcacctctga gcctcccttg ctgtcttgga cctgtctgtt gggtttagtc cgtggacatt
4081 tcagagggag atccccctcc catttaactg tcctcacagg cccttgccta ggatggatga
4141 ccaacactgc actcaatgag ccagcctctc ttttggggga atcaagcatt tgcttcctct
4201 agactacagc agggaaaggg aggagaaatc tgatgtctca actggcacat gaagcccatt
4261 cttggaacta tgcaaagggc agaggctggg agtttggacg cttagctcct acccctgtcc
4321 tacctcaccg gggcactttc agggtccagg ggcctctgaa gtctctaggc ctatatggga
4381 caatcaattc tgactgagct cccccattcc cctcgggtga ggatgactgt tatttttgta
4441 gctgagaacg tggaatccca cgggttttta ctgcccttca cccaacctct cccacctcca
4501 ccccacaatg aatgtattta ttgtgagaat ggctacactt ctttaggaat gcccccactt
4561 acaaccaggt gggtggaaca ggcatgtgac agagtgggga gcctgggctc agctcctccc
4621 cctgccgttg gttaataaac accctttttc cccacaaaaa aaaaaaaaaa aaaaaaaaaa
4681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//