LOCUS BC051029 6082 bp mRNA linear HTC 13-APR-2006
DEFINITION Homo sapiens fibronectin type III domain containing 3A, mRNA (cDNA
clone IMAGE:5579201), containing frame-shift errors.
ACCESSION BC051029
VERSION BC051029.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6082)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 6082)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: p Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..6082
/db_xref="H-InvDB:HIT000259187"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5579201"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 1927 a 1175 c 1180 g 1800 t
ORIGIN
1 agccgccgaa cttgaacgct tttctgaaga gagttttccc cgctcatctt ggggttaaaa
61 cctcgaaaac ccgccctctg tttgatcctg cgtggctgct tccagtacct ggcagttcct
121 ctccccgggc gagttaacca cctgttcagt cgggaggtgg actcgaggct gcagtcctcg
181 cccggtttta acaacctgga tcttcgaact tttgacacgg ctttggaaac gacgtcatgt
241 gttagaattg gagcgttatt cagtatatta atgtcttatt gataatggca gaacatccac
301 cactactgga tacaactcag atcttaagta gtgatatttc tcttttgtct gcccctattg
361 taagtgcaga tggaacacaa caggttattc tggtacaagt taacccagga gaagcattta
421 caataagaag agaagatgga cagtttcagt gcattacagg tcctgctcag gttccaatga
481 tgtccccaaa tggttctgtg cctcctatct atgtgcctcc tggatatgcc ccacaggtta
541 ttgaagacaa tggtgttcga agagttgtcg tggtccctca ggcaccagag tttcaccctg
601 gtagtcacac agttctccac cgttctccac atcctcctct acctggtttc attcctgtcc
661 caactatgat gccgcctcca ccacgtcata tgtactcacc cgtgactgga gctggagaca
721 tgacaacaca gtatatgcca cagtatcagt cttcacaagt ctatggagat gtagatgctc
781 actctacaca tggaaggtcc aactttagag atgaacgatc tagtaaaaca tatgaacgtt
841 tgcagaaaaa attgaaggat cgccaaggaa cacagaaaga taaaatgagc agtccaccat
901 catcacccca gaaatgccct tctcccatta atgaacataa tggacttata aaaggacaaa
961 ttgctggtgg tataaacaca ggatcagcaa aaatcaagtc tgggaagggg aaaggtggta
1021 cacaagttga tacagaaatt gaagaaaaag atgaagaaac taaagcattt gaagcacttc
1081 tttccaacat tgtcaaacca gtggcctccg acatccaggc aaggacagta gtacttacct
1141 ggtcaccacc ttccagcctc attaatggtg aaacagatga aagtagtgta ccagagctct
1201 atggttatga agttctgatc tcaagtactg gaaaagatgg gaaatacaaa agtgtatatg
1261 taggagaaga aacaaatatc actttaaatg atctcaagcc agccatggat taccatgcaa
1321 aagtccaggc agaatataat tctataaagg gaactccttc agaggctgaa atctttacca
1381 ccttgagctg tgaacctgat atacctaatc caccaaggat agccaatcgg accaaaaatt
1441 cactcacttt gcaatggaag gcacctagtg acaatggttc taaaatccaa aactttgtat
1501 tagaatggga tgaaggaaaa ggaaatggag aattttgtca gtgttacatg ggctcacaga
1561 aacaatttaa aattactaaa ctttcaccag caatgggctg taaattcaga ctatcggcca
1621 gaaatgacta tggtacaagt ggttttagtg aagaagtctt atattacacc tcaggctgtg
1681 ctccttctat gccagcaagt cctgtattaa ccaaggctgg aattacttgg ttatccttac
1741 aatggagtaa gccctcagga acaccatcag atgaaggaat ttcttacatt ttagagatgg
1801 aggaagaaac ttcaggatat ggttttaagc ctaaatatga tggagaagat cttgcttaca
1861 cagtgaaaaa tctcagacgt agtactaagt ataaatttaa ggttattgct tacaactcag
1921 aaggtaaaag taatccaagt gaagtagtag aatttactac ttgccctgat aaaccaggca
1981 tacctgtaaa gccttcagtg aaaggaaaga tacattcaca cagttttaaa ataacctggg
2041 atccaccaaa agacaatggc ggagcaacca tcaataaata tgtagtggag atggcagaag
2101 gttctaacgg aaacaaatgg gaaatgatat acagtggtgc taccagggaa catctttgtg
2161 atcgactgaa tccaggctgt ttctatcgtt tacgagttta ctgcatcagt gatggaggac
2221 agagtgcggt ctctgaatct ttacttgtgc agactccagc tgtgcctcct ggcccatgcc
2281 tccctcccag attacagggt agacccaaag caaaagaaat acagaccccc tctggttgat
2341 ggtggatcac ccatttcctg ttacagtgtg gaaatgtctc ctatagaaaa agatgaacct
2401 agagaagttt accaaggttc tgaagtagaa tgtacagtga gcagccttct tcctggaaag
2461 acatacagct tcagactacg tgcagctaac aaaatggggt ttggaccatt ttcagaaaaa
2521 tgtgatatta ctacagcccc tgggccacca gatcagtgca agccccctca agtgacatgt
2581 agatctgcaa cttgtgcaca agtgaattgg gaggttcctt tgagtaatgg aacagatgtc
2641 actgaatatc gactggagtg gggaggagtt gaaggaagta tgcagatatg ttactgtggg
2701 cctggtctca gttatgaaat aaaaggactt tcaccagcaa ctacctatta ttgcagggtc
2761 caggctctga gtgttgtggg tgcaggccct ttcagtgaag tagtagcctg tgtgactcca
2821 ccatcagttc ctggcattgt gacctgtctt caagaaataa gcgatgatga gatagaaaat
2881 ccccattatt caccttctac atgccttgca ataagctggg aaaagccttg tgatcatggt
2941 tcggaaatcc ttgcctacag catagacttt ggagataaac aatccctaac agtgggaaag
3001 gttacaagct atattatcaa caatttgcaa ccagatacaa catacagaat acgaattcaa
3061 gccttgaata gccttggagc tggtcctttc agccatatga taaaattaaa aactaagcct
3121 ctccctcctg atccacctcg tctggaatgt gttgccttta gccaccagaa ccttaagctg
3181 aaatggggag aaggaactcc aaagacattg tcaaccgatt ctattcagta ccaccttcag
3241 atggaggata agaatggacg gtttgtatcc ctatacagag gaccatgtca tacatacaaa
3301 gtacaaagac ttaatgagtc aacatcctat aaattctgta ttcaagcttg taatgaagct
3361 ggggaaggtc ccctctccca agaatatatt ttcactactc caaaatctgt cccagctgcc
3421 ttgaaagccc ccaaaataga gaaagtaaat gatcacattt gtgaaattac atgggagtgt
3481 ttacagccaa tgaaaggtga tccagttatt tacagtcttc aagttatgtt gggaaaagat
3541 tcagaattca aacagattta caagggtccc gactcttcct tccggtattc cagccttcag
3601 ctgaactgtg aatatcgctt ccgtgtatgt gccattcgcc agtgccaaga ctctctggga
3661 caccaggacc tcgtaggtcc ctacagcacc acagtgctct tcatctctca gaggactgaa
3721 ccaccagcca gcaccaacag agacactgtg gaaagcacaa ggacccgacg ggcactgagt
3781 gacgagcagt gtgctgccgt catccttgtg ctgtttgctt tcttttccat tttgattgcc
3841 tttatcattc agtactttgt aatcaagtga aaatataact ttatttttta actctattac
3901 attttatttt gtcatgtact aaaattattt ctgtattgct tttataaaaa acagtggcat
3961 ttagcactgg cattgagact atagcacatc atttttgcca ttttcagtgc ttatattgtt
4021 aggtagaggc tggcacttta ttagaatgca agccacaaaa atatcaattt tgtttttttt
4081 gttagggtgg gtcttctttt tttctttccc tctctctttt tttaacaaat gccttcttat
4141 agaaaaactt tctaagaggc aacaatttag aatggatatt ttgacgaatc ggcatgagtg
4201 taacagtgat aacctgatct gtttgtttta aagattatta ccaagtgaaa aattcagaat
4261 gaatagaatt tacactaaca tgctatataa aatgttaaag tctgatgctg tgaaagcaat
4321 ctagtgctat atttctacct cctcatttgt cttaattatt tggtaagtgg gattatgatg
4381 agtaactgga ggggcttaga aacaaaaact ggatgaaaga gtatgcatga agaaaagctt
4441 ctttgataaa tgtggagttc ttcattataa atatatattc atgaattcac agataagtac
4501 ttaaagaaca gacagtttac ttggcctaaa aatattttga tgtttactca aaaagtacct
4561 cttcaggtct tgagaacatg gaaaagaatt gagtgctttt aaatactttt tagaaagtaa
4621 tcataaaagt aaattgaatt tcaaacctat ttggcttctg ttttgtgaac ctttgaacta
4681 tatgtatgtg tataagggta tacacataca tatatggcat ataacaagtg tacacatata
4741 cacataacaa gtgtagaagt atatattaca tacatacact cactctgtct ggtataggct
4801 aattttgaag aactcccata agtttctgct gcttctccca taactgctgc caccaccatc
4861 agaattcata atcaaaccta acctttttgt ttggggcacc aaatctgaag acaaaattaa
4921 tttgcaccag taaacttcaa gctgctttct ttcttgaaaa ctaaacgttt aacgtataat
4981 gtctgtttgg atactgttcc aaattgttga ttgcatgtgg ttaatgttgc attagagcac
5041 tttgcaattg cataattcat taatgttttg tgagcttgca tttgtgagtt attggatgat
5101 cagactgaat tttgtcaagt atcacattgt acatcttgcc tagatgtcga tgactgcaag
5161 taataataca gtttataatg aaactatcta caattcttgt tttagcacat ctgttatccg
5221 taaaacacct gtaactagct tttttaattt attatttgaa ttttaggata gcgaatcact
5281 aatttttagt tgctgaggtt ggcattttag tgattattaa gcacttctgt cagtctttga
5341 aaaaagaacg tattttttgt gctttgaaga tctctgaaga atttctttta taatagaatg
5401 ggcatgtatt gtaacagttt tatgtcaaat gatctgtgct gtagaaaaac attaaccctt
5461 gttcaaaaaa gaaatggata aacttggcct ttctaagtgg taagaatgac ctgtcactat
5521 aatatactgt atgtttacat tttatttaaa tttaatctct tatgtatagg gtgataacct
5581 tccccagaaa caacagtgat tgcgattgtt ttctagaaac ttctttaaag tgccacattt
5641 ggcagtacaa atgagtctga gtgtaatagc ccagagattt atatatagtt gaatgtctaa
5701 aatggtaaaa tgtgccactg tgtcaagtta cagtggctta tgtttttcat agtaattcaa
5761 atgaacttcc tatttttgat agtaaatgtc atttaatagt atacttgcca tttgagcctc
5821 actgcaaaat tagtgcagag gagaaaacaa tttttaatgt aatcttgatt ttacctcata
5881 tactgtacat tccaaaaact ctaaactttt taaagattat agatacacta ccaaacatat
5941 caccttaaaa ttgtataagg ctgaatgaac ttcatacaaa tgaaaaaaat ctcataaaaa
6001 tacataaact atgtagcaaa agtatctgta aaatccatgg aaaataaaag ttgtatcatt
6061 ctttttgaaa aaaaaaaaaa aa
//