LOCUS BC051028 4460 bp mRNA linear HTC 01-NOV-2004
DEFINITION Homo sapiens EPH receptor B6, mRNA (cDNA clone IMAGE:5167011), with
apparent retained intron.
ACCESSION BC051028
VERSION BC051028.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4460)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4460)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (11-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: f Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4758291
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4460
/db_xref="H-InvDB:HIT000259186"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5167011"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 918 a 1350 c 1333 g 859 t
ORIGIN
1 ccgggaccca gcttggcgac ggcgatctcg acgcgggccc ccaggatctc ccggcgcccc
61 acctctggag cagcccctgc cgccagcgtc aggtccaccc cggaatccca gggactctcg
121 gcgccgaacg gacccgggcc gggtgcaacg gggtccccgg actggagaag acgcgggtgg
181 caccgtgcga gctccaggag ccccgggtcc actgcgaggc ctcggggggc gcagacctgc
241 agagactgcg gccaacggga agaaataaag ggattatagt ccacccaatt cacagacttc
301 tgagactcag acacgaggag agatagagaa ccgccaatct ctagatcaac aagcaaagga
361 ggtgccaagc ctgtttgtct tcattgtgac actggagtct agatgctggg aagtccaaga
421 tcagggtgcc ggcatggtca gttcctggcg aagcctctct tctaggtttc agactgccct
481 cttctttgtt gtgtcctcga atggcagaaa aaggggtggc tgttggagga agggaggaga
541 gtaaatgaag agaaagaact ggaataaccc cttgcagaaa aaaaaaaaaa aaagggtaag
601 attgacccag aaacaccctc tgccccactt ctaggaagga gagctgtgag aaatgaacac
661 agagacaggg tcacacaggg agtaggcacg aacactccaa gatggtcaaa tgtgcaccgg
721 ctcaggagag gcagtatgca acctggcttc tgtcccatgg tgggtgctgg ggcgattgga
781 gagctgtagg aggagacaca gacacggggt cagcttttgg agcttgggct gtatatgaag
841 aaacactttc ttcccacctg cctcttctgg tcttgtgtgt ctcctcagga agcaagctta
901 gctgtacacc ctgagtcttg caaaagctgc agccccaccc aggagcaggg tggtggctgg
961 ggcgatggtg gacgccctga agatgtccca tggctactga aggggctgcc cagttaggga
1021 acagagtggc gggcatggtg tgtagcctat gggtgctgct cctggtgtct tcagttctgg
1081 ctctggaaga ggtattgctg gacaccaccg gagagacatc tgagattggc tggctcacct
1141 acccaccagg ggggtgggac gaggtgagtg ttctggacga ccagcgacgc ctgactcgga
1201 cctttgaggc atgtcatgtg gcaggggccc ctccaggcac cgggcaggac aattggttgc
1261 agacacactt tgtggagcgg cgcggggccc agagggcgca cattcgactc cacttctctg
1321 tgcgggcatg ctccagcctg ggtgtgagcg gcggcacctg ccgggagacc ttcacccttt
1381 actaccgtca ggctgaggag cccgacagcc ctgacagcgt ttcctcctgg cacctcaaac
1441 gctggaccaa ggtggacaca attgcagcag acgagagctt tccctcctcc tcctcctcct
1501 cctcctcttc ttcctctgca gcgtgggctg tgggacccca cggggctggg cagcgggctg
1561 gactgcaact gaacgtcaaa gagcggagct ttgggcctct cacccaacgc ggcttctacg
1621 tggccttcca ggacacgggg gcctgcctgg ccctggtcgc tgtcaggctc ttctcctaca
1681 cctgccctgc cgtgctccga tcctttgctt cctttccaga gacgcaggcc agtggggctg
1741 ggggggcctc cctggtggca gctgtgggca cctgtgtggc tcatgcagag ccagaggagg
1801 atggagtagg gggccaggca ggaggcagcc cccccaggct gcactgcaac ggggagggca
1861 agtggatggt agctgtcggg ggctgccgct gccagcctgg ataccaacca gcacgaggag
1921 acaaggcctg ccaagcctgc ccacgggggc tctataagtc ttctgctggg aatgctccct
1981 gctcaccatg ccctgcccgc agtcatgctc ccaacccagc agcccccgtt tgcccctgcc
2041 tggagggctt ctaccgggcc agttccgacc caccagaggc cccctgcact ggtcctccat
2101 cggctcccca ggagctttgg tttgaggtgc aaggctcagc actcatgcta cactggcgcc
2161 tgcctcggga gctggggggt cgaggggacc tgctcttcaa tgtcgtgtgc aaggagtgtg
2221 aaggccgcca ggaacctgcc agcggtggtg ggggcacttg tcaccgctgc agggatgagg
2281 tccacttcga ccctcgccag agaggcctga ctgagagccg agtgttagtg gggggactcc
2341 gggcacacgt accctacatc ttagaggtgc aggctgttaa tggggtgtct gagctcagcc
2401 ctgaccctcc tcaggctgca gccatcaatg tcagcaccag ccatgaaggt gagctctttt
2461 ccttggcctt caggatcccc tgcctccgct cctttgagcc cccttcccta ctcctgatct
2521 ccagcctggt ccacccctgc cgccctcccc tcaaggctga tcctgctccc agggactcct
2581 atccccataa taattttcct tttgcactct agtgccctct gctgtccctg tggtgcacca
2641 ggtgagccgg gcatccaaca gcatcacggt gtcctggccg cagcccgacc agaccaatgg
2701 gaacatcctg gactatcagc tccgctacta tgaccaggca gaagacgaat cccactcctt
2761 caccctgacc agcgagacca acactgccac cgtgacacag ctgagccctg gccacatcta
2821 tggtttccag gtgcgggccc ggactgctgc cggccacggc ccctacgggg gcaaagtcta
2881 tttccagaca cttcctcaag gggagctgtc ttcccagctt ccggaaagac tctccttggt
2941 gatcggctcc atcctggggg ctttggcctt cctcctgctg gcagccatca ccgtgctggc
3001 ggtcgtcttc cagcggaagc ggcgtgggac tggctacacg gagcagctgc agcaatacag
3061 cagcccagga ctcggggtga agtattacat cgacccctcc acctacgagg acccctgtca
3121 ggccatccga gaacttgccc gggaagtcga tcctgcttat atcaagattg aggaggtcat
3181 tgggacaggc tcttttggag aagtgcgcca gggccgcctg cagccacggg gacggaggga
3241 gcagactgtg gccatccagg ccctgtgggc cgggggcgcc gaaagcctgc agatgacctt
3301 cctgggccgg gccgcagtgc tgggtcagtt ccagcacccc aacatcctgc ggctggaggg
3361 cgtggtcacc aagagccgac ccctcatggt gctgacggag ttcatggagc ttggccccct
3421 ggacagcttc ctcaggcagc gggagggcca gttcagcagc ctgcagctgg tggccatgca
3481 gcggggagtg gctgctgcca tgcagtacct gtccagcttt gccttcgtcc atcgctcgct
3541 gtctgcccac agcgtgctgg tgaatagcca cttggtgtgc aaggtggccc gtcttggcca
3601 cagtcctcag ggcccaagtt gtttgcttcg ctgggcagcc ccagaggtca ttgcacatgg
3661 aaagcataca acatccagtg atgtctggag ctttgggata ctcatgtggg aagtgatgag
3721 ttatggagaa cggccttact gggacatgag tgagcaggag gtactaaatg caatagagca
3781 ggagttccgg ctgcccccgc ctccaggctg tcctcctgga ttacatctac ttatgttgga
3841 cacttggcag aaggaccgtg cccggcggcc tcattttgac cagctggtgg ctgcatttga
3901 caagatgatc cgcaagccag ataccctgca ggctggcggg gacccagggg aaaggccttc
3961 ccaggccctt ctgacccctg tggccctgga ctttccttgt ctggactcac cccaggcctg
4021 gctttcagcc attggactgg agtgctacca ggacaacttc tccaagtttg gcctctgtac
4081 cttcagtgat gtggctcagc tcagcctaga agacctgcct gccctgggca tcaccctggc
4141 tggccaccag aagaagctgc tgcaccacat ccagctcctt cagcaacacc tgaggcagca
4201 gggctcagtg gaggtctgag aatgacgata cccgtgactc agccctggac actggtccga
4261 gaagggacat gtgggacgtg agccgggctc caacagcctc tgtgagagat gccccacacc
4321 aaacccaacc ctcccgatgg ctgcattccc tggtcctccg cctctccacc agccccctcc
4381 tcattaaagg gaaagaaggg aatttgcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4441 aaaaaaaaaa aaaaaaaaaa
//