LOCUS BC050717 2476 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens nucleoporin 62kDa, mRNA (cDNA clone MGC:60330 IMAGE:6021336), complete cds. ACCESSION BC050717 VERSION BC050717.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2476) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2476) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC050717.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 110 Row: h Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27477088. FEATURES Location/Qualifiers source 1..2476 /db_xref="H-InvDB:HIT000053571" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:60330 IMAGE:6021336" /tissue_type="Pancreas, epithelioid carcinoma" /clone_lib="NIH_MGC_70" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2476 /gene="NUP62" /gene_synonym="DKFZp547L134" /gene_synonym="FLJ20822" /gene_synonym="MGC841" /gene_synonym="p62" /db_xref="GeneID:23636" /db_xref="HGNC:HGNC:8066" /db_xref="MIM:605815" CDS 207..1775 /gene="NUP62" /gene_synonym="DKFZp547L134" /gene_synonym="FLJ20822" /gene_synonym="MGC841" /gene_synonym="p62" /codon_start=1 /product="nucleoporin 62kDa" /protein_id="AAH50717.1" /db_xref="GeneID:23636" /db_xref="HGNC:HGNC:8066" /db_xref="MIM:605815" /translation="MSGFNFGGTGAPTGGFTFGTAKTATTTPATGFSFSTSGTGGFNF GAPFQPATSTPSTGLFSLATQTPATQTTGFTFGTATLASGGTGFSLGIGASKLNLSNT AATPAMANPSGFGLGSSNLTNAISSTVTSSQGTAPTGFVFGPSTTSVAPATTSGGFSF TGGSTAQPSGFNIGSAGNSAQPTAPATLPFTPATPAATTAGATQPAAPTPTATITSTG PSLFASIATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAAT ATATTTSSSSTTGFALNLKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQLE SLINKWSLELEDQERHFLQQATQVNAWDRTLIENGEKITSLHREVEKVKLDQKRLDQE LDFILSQQKELEDLLSPLEELVKEQSGTIYLQHADEEREKTYKLAENIDAQLKRMAQD LKDIIEHLNTSGAPADTSDPLQQICKILNAHMDSLQWIDQNSALLQRKVEEVTKVCEG RRKEQERSFRITFD" BASE COUNT 574 a 762 c 682 g 458 t ORIGIN 1 cgagctgcga aagggcggga aaggcagttg gagaagaggt aagcggttac tcactccatg 61 gctgcagcaa ggagaggcgg cggcggcctc ggctgaagaa agaaggtggg agcggagagc 121 gcaggcgtga aatcttccca aggctgcaga caccgacgga tttgctttgg gagccagagt 181 agctgccgcc accagagtcc ggagccatga gcgggtttaa ttttggaggc actggggccc 241 ctacaggcgg gttcacgttt ggcactgcaa agacggcaac aaccacacct gctacagggt 301 tttctttctc cacctctggc actggagggt ttaattttgg ggctcccttc caaccagcca 361 caagtacccc ttccaccggc ctgttctcac ttgccaccca gactccggcc acacagacga 421 caggcttcac ttttggaaca gcgactcttg cttcgggggg aactggattt tctttgggga 481 tcggtgcttc aaagctcaac ttgagcaaca cagctgccac cccagccatg gcaaacccca 541 gcggctttgg gctgggcagc agcaacctca ctaatgccat atcgagcacc gtcacctcca 601 gccagggcac agcacccacc ggctttgtgt ttggcccctc caccacctct gtggctccag 661 ctaccacatc tggaggcttc tcattcactg gtggaagcac ggcccaaccc tccggtttca 721 acattggctc agcagggaat tcagcccagc ccacggcacc tgccacgttg cccttcactc 781 cggccacgcc agcagccacc acagcaggtg ccacacagcc agctgctccc acacccacag 841 ccaccatcac cagcactggg cccagcctct ttgcgtcaat agcaactgct ccaacctcat 901 ctgccaccac tggactctcc ctctgtaccc ctgtgaccac agcgggcgcc cccactgctg 961 ggacacaggg cttcagctta aaggcacctg gagcagcttc cggcacctcc acaacaacat 1021 ccaccgctgc caccgccacc gccaccacca ccagcagcag cagcaccacc ggctttgcct 1081 tgaatttaaa accactggcg ccagccggga tccccagcaa tacagcagct gccgtgaccg 1141 ctccacctgg ccctggcgca gctgcagggg cggctgccag ctccgccatg acctacgcgc 1201 agctggagag cctgatcaac aaatggagcc tggagctaga ggaccaggag cggcacttcc 1261 tccagcaggc cacccaggtc aacgcctggg accgcacgct gatcgagaat ggagaaaaga 1321 tcaccagcct gcaccgcgag gtggagaagg tgaagctgga ccagaagagg ctggaccagg 1381 agctcgactt catcctgtcc cagcagaagg agctggaaga cctgctgagc ccactggagg 1441 agttggtcaa ggagcagagc gggaccatct acctgcagca cgcggatgag gagcgtgaga 1501 aaacctacaa gctggctgag aacatcgacg cacagctcaa gcgcatggcc caggatctca 1561 aggacatcat cgagcacctg aacacgtccg gggcccccgc cgacaccagt gacccactgc 1621 agcagatctg caagatcctc aatgcgcaca tggactcact gcagtggatc gaccagaact 1681 cggccctgct gcagaggaag gtggaggagg tgaccaaggt gtgcgagggc cggcgcaagg 1741 agcaggagcg cagcttccgg atcacctttg actgagcgac agcagccctg gggcccgcag 1801 gtccctaggg agttcatgag gggaatgcgc cctgttgtct gtagtttggg gttgtggcaa 1861 gatacttgtt tgtttgtttc tttctttcac atgactgccc ttgacatgat cgctgtgtgc 1921 tttgcgtttt tccatttagg agggtattct gggccttctg cccaggcagc agcctcatgg 1981 gtgtggcttc tgtggctttc atttgagtat ctttggcccc ttttcaccta ctgcgaccac 2041 ccacctcatc ctggctcagc ctggtgatgg agaagtgctg atggtcttgg tcccagccag 2101 ggtcgtgggg gcagccactc tctccaaagc atagtcatag gtgtcatgaa aaaataccaa 2161 atgtaagaga acctccaagt cagggcgcag tggctcaccc ctgtaatctc agcactttgg 2221 gtggccaagg cgggcagatg acttgaggtc aggagttcga gaccagcctg gccaacatgg 2281 tgaaaccccg tctctactaa aaatacaaaa attagtcagg tgtggtggac gcctgtgatc 2341 tcaatctcag ctactcggga ggctgaggca ggagaatcac ttgaacccag gaggtgttgc 2401 agtgaaccaa gatcacacca ctgcactcca gcctaggcaa cagagactct gtctcaaaaa 2461 aaaaaaaaaa aaaaaa //