LOCUS BC050716 1325 bp mRNA linear HUM 21-OCT-2003
DEFINITION Homo sapiens neurotrimin, mRNA (cDNA clone MGC:60329
IMAGE:6166839), complete cds.
ACCESSION BC050716
VERSION BC050716.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1325)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1325)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: m Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7705412.
FEATURES Location/Qualifiers
source 1..1325
/db_xref="H-InvDB:HIT000053570"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60329 IMAGE:6166839"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1325
/gene="HNT"
/gene_synonym="MGC60329"
/gene_synonym="NTM"
/db_xref="GeneID:50863"
/db_xref="MIM:607938"
CDS 15..965
/gene="HNT"
/gene_synonym="MGC60329"
/gene_synonym="NTM"
/codon_start=1
/product="HNT protein"
/protein_id="AAH50716.1"
/db_xref="GeneID:50863"
/db_xref="MIM:607938"
/translation="MGVCGYLFLPWKCLVVVSLRLLFLVPTGVPVRSGDATFPKAMDN
VTVRQGESATLRCTIDNRVTRVAWLNRSTILYAGNDKWCLDPRVVLLSNTQTQYSIEI
QNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCIAT
GRPEPTVTWRHISPKAVGFVSEDEYLEIQGITREQSGDYECSASNDVAAPVVRRVKVT
VNYPPYISEAKGTGVPVGQKGTLQCEASAVPSAEFQWYKDDKRLIEGKKGVKVENRPF
LSKLIFFNVSEHDYGNYTCVASNKLGHTNASIMLFGETVL"
misc_feature 144..413
/gene="HNT"
/gene_synonym="MGC60329"
/gene_synonym="NTM"
/note="IG; Region: Immunoglobulin"
/db_xref="CDD:smart00409"
misc_feature 456..635
/gene="HNT"
/gene_synonym="MGC60329"
/gene_synonym="NTM"
/note="IGc2; Region: Immunoglobulin C-2 Type"
/db_xref="CDD:smart00408"
misc_feature 711..944
/gene="HNT"
/gene_synonym="MGC60329"
/gene_synonym="NTM"
/note="IG; Region: Immunoglobulin"
/db_xref="CDD:smart00409"
BASE COUNT 398 a 295 c 375 g 257 t
ORIGIN
1 tgtggctgtc gagaatgggg gtctgtgggt acctgttcct gccctggaag tgcctcgtgg
61 tcgtgtctct caggctgctg ttccttgtac ccacaggagt gcccgtgcgc agcggagatg
121 ccaccttccc caaagctatg gacaacgtga cggtccggca gggggagagc gccaccctca
181 ggtgcactat tgacaaccgg gtcacccggg tggcctggct aaaccgcagc accatcctct
241 atgctgggaa tgacaagtgg tgcctggatc ctcgcgtggt ccttctgagc aacacccaaa
301 cgcagtacag catcgagatc cagaacgtgg atgtgtatga cgagggccct tacacctgct
361 cggtgcagac agacaaccac ccaaagacct ctagggtcca cctcattgtg caagtatctc
421 ccaaaattgt agagatttct tcagatatct ccattaatga agggaacaat attagcctca
481 cctgcatagc aactggtaga ccagagccta cggttacttg gagacacatc tctcccaaag
541 cggttggctt tgtgagtgaa gacgaatact tggaaattca gggcatcacc cgggagcagt
601 caggggacta cgagtgcagt gcctccaatg acgtggccgc gcccgtggta cggagagtaa
661 aggtcaccgt gaactatcca ccatacattt cagaagccaa gggtacaggt gtccccgtgg
721 gacaaaaggg gacactgcag tgtgaagcct cagcagtccc ctcagcagaa ttccagtggt
781 acaaggatga caaaagactg attgaaggaa agaaaggggt gaaagtggaa aacagacctt
841 tcctctcaaa actcatcttc ttcaatgtct ctgaacatga ctatgggaac tacacttgcg
901 tggcctccaa caagctgggc cacaccaatg ccagcatcat gctatttggt gagactgtgc
961 tctgagctgg gcaagaagag gggagagggt gcagaacggg agagctgggt gggagggccc
1021 ctcaaggcca gggtcagagg ttagcagggt atcagtggac atggagaggg aggaaaaaaa
1081 agagagagac acagaaagaa atggagagag agggacagag agacagggag gaggcagaca
1141 gaaagagaaa gaacaagaga tacagtttac atgtatacaa agtagtatat gtatagtaca
1201 tgtataaaag tagatctcag aagtgggaaa aggaaaatga aaaagaatgt tcatgtttca
1261 ttctataatg gaaaagatcc cgagatagga gaaaaatact ttggaatgcc aaaaaaaaaa
1321 aaaaa
//