LOCUS BC050712 1872 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens vacuolar protein sorting 28 homolog (S. cerevisiae),
mRNA (cDNA clone IMAGE:5188705), containing frame-shift errors.
ACCESSION BC050712
VERSION BC050712.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1872)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1872)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: c Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34452691
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..1872
/db_xref="H-InvDB:HIT000099264"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5188705"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 377 a 558 c 596 g 341 t
ORIGIN
1 cgagccgtcc aggtctcagt gctgtgcccc ccccagagcc tagaggatgt ttcatgggat
61 cccagccacg ccgggcatag gaggtgagtg tggctggaag ggcgcaggct ttcagccgct
121 tctgcagggg ctgacgggca gtattgggta ttggggatcg ggggtgggga ggtatctgac
181 cctgctctcg tacagccttg ggggtggcca ggggctaaat agttcattgc aggagcactg
241 agggctcaga aacctccaga cagaactggc ttggtcctgc tgggcagaga tgatgagctt
301 cggtgtggcc agaacggtgg gggtcctggg caccctgtgt caccaatccc aggggagagg
361 ctgtgtgtgg tgagccttgt tggcactgca tcatgagcca cgagcagggc gtggccactg
421 ttgtgcaggt gactccgcca gggagccatg gtggagctgg ggagctgggc ctgtcatgcg
481 gtcccctggg gagccgcagt ggagctgggg agctgggcct gtcatgcggt cccccgggga
541 gccgcagtgg agctggggag ctgggcctgt catgcggccc ccggcttctc agaggtgtta
601 tcatcaggtc cccccacaca ctgatagggg tgaggttgga acctctgtgc tccagctccc
661 tctgggctct ttgggaccca gcctgggagg cctcagggag gaactgaaat ggagactggg
721 actggagtct gcccttgggt tccctttggg gccagcctgc cagctctctg ccttctcttg
781 cagcccctgg gaacaagccg gagctgtatg aggtgagtgg tgggtgccca cccggccggc
841 attggccaac agcaaatgcc tgtgtggcct caccagggtc ctgcagcccc tgttggcact
901 ggcccacaga gcccgctctc tccggcagga agtgaagttg tacaagaacg cccgggagag
961 ggagaagtac gacaacatgg cagagctgtt tgcggtggtg aagacaatgc aagccctgga
1021 gaaggcctac atcaaggact gtgtctcccc cagcgagtac actgcagcct gctcccggct
1081 cctggtccaa tacaaagctg ccttcaggca ggtccagggc tcagaaatca gctctattga
1141 cgaattctgc cgcaagttcc gcctggactg cccgctggcc atggagcgga tcaaggagga
1201 ccggcccatc accatcaagg acgacaaggg caacctcaac cgctgcatcg cagacgtggt
1261 ctcgctcttc atcacggtca tggacaagct gcgcctggag atccgcgcca tggatgagat
1321 ccagcccgac ctgcgagagc tgatggagac catgcaccgc atgagccacc tcccacccga
1381 ctttgagggc cgccagacgg tcagccagtg gtgggtgtcc ctcccagcca ggcagagccc
1441 cgcagtgccc gagaccctcc cagccaggcg gagccccgca gtgcccctga ggccctcagc
1501 ccccacatgc cctgtgctgc actcccaggc tgcagaccct gagcggcatg tcggcgtcag
1561 atgagctgga cgactcacag gtgcgtcaga tgctgttcga cctggagtca gcctacaacg
1621 ccttcaaccg cttcctgcat gcctgagccc ggggcactag cccttgcaca gaagggcaga
1681 gtctgaggcg atggctcctg gtcccctgtc cgccacacag gccgtggtca tccacacaac
1741 tcactgtctg cagctgcctg tctggtgtct gtctttggtg tcagaacttt gggggccggg
1801 cccctcccca caataaagat gctctccgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aa
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