LOCUS BC050706 2082 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens CDK5 regulatory subunit associated protein 1, mRNA (cDNA clone MGC:60311 IMAGE:4418659), complete cds. ACCESSION BC050706 VERSION BC050706.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2082) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2082) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 110 Row: a Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 28872781. FEATURES Location/Qualifiers source 1..2082 /db_xref="H-InvDB:HIT000053564" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:60311 IMAGE:4418659" /tissue_type="Duodenum, adenocarcinoma" /clone_lib="NIH_MGC_88" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2082 /gene="CDK5RAP1" /gene_synonym="C42" /gene_synonym="CDK5RAP1.3" /gene_synonym="CDK5RAP1.4" /gene_synonym="CGI-05" /gene_synonym="HSPC167" /db_xref="GeneID:51654" /db_xref="HGNC:HGNC:15880" /db_xref="MIM:608200" CDS 106..1869 /gene="CDK5RAP1" /gene_synonym="C42" /gene_synonym="CDK5RAP1.3" /gene_synonym="CDK5RAP1.4" /gene_synonym="CGI-05" /gene_synonym="HSPC167" /codon_start=1 /product="CDK5 regulatory subunit associated protein 1" /protein_id="AAH50706.1" /db_xref="GeneID:51654" /db_xref="HGNC:HGNC:15880" /db_xref="MIM:608200" /translation="MHPLQCVLQVQRSLGWGPLASVSWLSLRMCRAHSSLSSTMCPSP ERQEDGARKDFSSRLAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLMMDELLGRQRKV YLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQEADVILLVTCSIREKAEQTIWNRLH QLKALKTRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVA ESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERS RPIASILEEVKKLSEQGLKEVTLLGQNVNSFRDNSEVQFNSAVPTNLSRGFTTNYKTK QGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGS SRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREV QYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQ LVLVEGLSKRSATDLCGRNDGNLKVIFPDAEMEDVNNPGLRVRAQPGDYVLVKITSAS SQTLRGHVLCRTTLRDSSAYC" BASE COUNT 522 a 489 c 580 g 491 t ORIGIN 1 aacgcagcgg cggacctgtg aggggatccg acttgccggc agaacttacg ctgcgggacc 61 ccgggcactg ttgctgctgc gggagactgt gggctgttta gtgccatgca ccctttacag 121 tgtgtcctcc aagtgcagag gtctctgggg tggggaccat tggcctctgt gtcttggctg 181 tcgctgagga tgtgcagggc acacagcagt ctctctagta ccatgtgtcc cagtccagag 241 aggcaggagg atggagctcg gaaggatttc agctccaggc tggctgctgg accgactttt 301 caacattttt taaaaagtgc ctcagctcct caggagaagc tgtcttcaga agtggaagac 361 ccacctccct atctcatgat ggatgaactt cttggaaggc agagaaaagt ctacctcgag 421 acctatggct gccagatgaa tgtgaatgac acagagatag cctggtccat cttacagaag 481 agtggctacc tgcggaccag taacctccaa gaggcagatg tgattctcct tgtcacgtgc 541 tctatcaggg agaaggctga gcagaccatc tggaaccgtt tacatcagct taaagccttg 601 aagacaaggc ggccccgctc ccgggttcct ctgaggattg gaattctagg ctgcatggct 661 gagaggttga aggaggagat tctcaacaga gagaaaatgg tagatatttt ggctggtcct 721 gatgcctacc gggaccttcc ccggctgctg gctgttgctg agtcgggcca gcaagctgcc 781 aacgtgctgc tctctctgga cgagacctat gctgatgtca tgccagtcca gacaagcgcc 841 agtgccacgt ctgcctttgt gtcaatcatg cgaggctgtg acaacatgtg tagctactgc 901 attgttcctt tcacccgggg cagggagagg agtcggccta ttgcctccat tctagaggaa 961 gtgaagaagc tttctgagca ggggctgaaa gaagtgacac ttcttggtca gaatgttaat 1021 agttttcggg acaattcgga ggtccagttc aacagtgcag tgcctaccaa tctcagtcgt 1081 ggctttacca ccaactataa aaccaagcaa ggaggacttc gttttgctca tcttctggat 1141 caggtctcca gagtagatcc tgaaatgagg atccgtttta cctctcccca ccccaaggat 1201 tttcctgatg aggttctgca gctgattcat gagagagata acatctgtaa acagatccac 1261 ctgccagccc agagtggaag cagccgtgtg ttggaggcca tgcggagggg atattcaaga 1321 gaagcttatg tggagttagt tcaccatatt agagaatcta ttccaggtgt gagcctcagc 1381 agcgatttca ttgctggctt ttgtggtgag acggaggaag atcacgtcca gacagtctct 1441 ttgctccggg aagttcagta caacatgggc ttcctctttg cctacagcat gagacagaag 1501 acacgggcat atcataggct gaaggatgat gtcccggaag aggtaaaatt aaggcgtttg 1561 gaggaactca tcactatctt ccgagaagaa gcaacaaaag ccaatcagac ctctgtgggc 1621 tgtacccagt tggtgctagt ggaagggctc agtaaacgct ctgccactga cctgtgtggc 1681 aggaatgatg gaaaccttaa ggtgatcttc cctgatgcag agatggagga tgtcaataac 1741 cctgggctca gggtcagagc ccagcctggg gactatgtgc tggtgaagat cacctcagcc 1801 agttctcaga cacttagggg acatgttctc tgcaggacca ctctgaggga ctcttctgca 1861 tattgctgac ctgagaggat ggcctcagag ctgacttggg caatcctccc caacaggaag 1921 gggagacatt gcctgccact gaggaaacag gtcatgaagg tggagataag ctgcaagggg 1981 cgaagcaact ttatgtcagt ggaaaacgtg tctctttaaa gctgctatgt gaacagcttt 2041 tacagtcatt aaatttacct aaactaaaaa aaaaaaaaaa aa //