LOCUS BC050693 1913 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens translin-associated factor X interacting protein 1,
mRNA (cDNA clone IMAGE:5241009), with apparent retained intron.
ACCESSION BC050693
VERSION BC050693.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1913)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1913)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: d Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923845
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1913
/db_xref="H-InvDB:HIT000259173"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5241009"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 558 a 462 c 548 g 345 t
ORIGIN
1 ctgtacgcta ccacagcttc ccaggccgcg ggtgctgatt gcccgcctgc ccgtgggtca
61 tggcctgcca gcagtcgcgg taccacagct tctcgtccgc gtcgagatta cagccacggc
121 cttcaggagt gaccatagac gaatcctttc tcacagaaga caagagcacc cagaatcgca
181 agcttcttca gaaacgaagg acgctggtga ccaaactgag gaagaacttg gctgaggagt
241 acctgcacta cctcagtgag cgagatgcct gtaagatcct catcgcagac ctgaatgagc
301 tgcggtacca gcgggaggac atgtcattag cccagtcgcc aggcatctgg ggggaggacc
361 ctgtgaagtt aaccctggct cttaagatga cccggcaaga cctgacccgc acgcagatgg
421 aactcaacaa catgaaggcc aactttggag atgtggtccc caggagggac tttgaaatgc
481 aggagaagac caacaaggat cttcaggagc aggtgctggc aggcaggcag ggccaggagg
541 gtaggacggg gtctcacagg tggggggcca gggccaatgt ccttgcccac agctggacac
601 cctgagagcc agctacgagg aggttcgcaa ggagcatgag atcctcatgc agctgcacat
661 gagcacgctg aaggaacggg accaattctt ctctgagctg caggagatcc agcgcacttc
721 cacgccgcgg cctgactgga ccaagtgcaa agatgtggtg gctgggggcc cagagcgctg
781 gcagatgctg gctgagggca agaacagcga ccagctggtg gacgtgctcc tggaagagat
841 tggttcgggg ctgctgcggg agaaagactt cttccctggt ctgggctatg gggaagccat
901 ccctgctttt cttcggtttg atggcctcgt ggagaacaag aagccaagca agaaggacgt
961 ggtcaacctc ctcaaggatg cctggaagga acgtcttgct gaggagcaga aagagacgtt
1021 cccagatttc ttcttcaatt tcctggagca tcgctttggg cccagtgatg ccatggcctg
1081 ggcttatact atttttgaaa atatcaagat cttccactcc aacgaggtta tgagtcagtt
1141 ctatgcagtc ttgatgggaa agcggagtga gaatgtgtat gtcacccaga aggagacagt
1201 agcccagctg ctgaaggaga tgacaaatgc tgacagtcag aacgaggggc tactaaccat
1261 ggagcagttc aacactgtcc tcaagagtac cttccctctc aagacagaag agcaaatcca
1321 ggagctgatg gaggcagggg gctggcatcc cagcagcagc aatgcagact tgctcaacta
1381 ccgctcactg tttatggagg atgaggaggg ccagagtgag ccctttgtgc aaaaactctg
1441 ggaacaatac atggatgaga aggacgagta cttacagcag ctaaagcagg agcttggcat
1501 agaactccat gaggaagtga ctctgcccaa gctgcgaggg ggcctgatga ccatcgaccc
1561 cagcctggac aagcagacag tgaacaccta catgagccag gccttccagc tccctgagtc
1621 ggaaatgcca gaggagggtg acgagaagga agaagccgtg gtggaaatcc tccagactgc
1681 cctggagcgg cttcaggtga ttgacatcag gcgtgtggga cctcgagagc cagagcctgc
1741 aagctaggaa cttgtgggca gcctgcgtac tccagtcctg ctaaccccta gcttttaata
1801 taaaagtgtt tgtctgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//