LOCUS BC050689 1508 bp mRNA linear HUM 24-JAN-2005
DEFINITION Homo sapiens potassium voltage-gated channel, KQT-like subfamily,
member 5, mRNA (cDNA clone IMAGE:6137109), complete cds.
ACCESSION BC050689
VERSION BC050689.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1508)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1508)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: j Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28373064
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1508
/db_xref="H-InvDB:HIT000053557"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6137109"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1508
/gene="KCNQ5"
/gene_synonym="Kv7.5"
/db_xref="GeneID:56479"
/db_xref="MIM:607357"
CDS 85..1368
/gene="KCNQ5"
/gene_synonym="Kv7.5"
/codon_start=1
/product="KCNQ5 protein"
/protein_id="AAH50689.1"
/db_xref="GeneID:56479"
/db_xref="MIM:607357"
/translation="MPRHHAGGEEGGAAGLWVKSGAAAAAAGGGRLGSGMKDVESGRG
RVLLNSAAARGDGLLLLGTRAATLGGGGGGLRESRRGKQGARMSLLGKPLSYTSSQSC
RRNVKYRRVQNYLYNVLERPRGWAFIYHAFVFLLVFGCLILSVFSTIPEHTKLASSCL
LILEFVMIVVFGLEFIIRIWSAGCCCRYRGWQGRLRFARKPFCVIDTIVLIASIAVVS
AKTQGNIFATSALRSLRFLQILRMVRMDRRGGTWKLLGSVVYAHSKELITAWYIGFLV
LIFSSFLVYLVEKDANKEFSTYADALWWGTITLTTIGYGDKTPLTWLGRLLSAGFALL
GISFFALPAGILGSGFALKVQEQHRQKHFEKRRNPAANLIQCVWRSYAADEKSVSIAT
WKPHLKALHTCSPTKKEQGEASSRFVISLLLHVCL"
BASE COUNT 353 a 366 c 417 g 372 t
ORIGIN
1 ctccttgaaa cccgccggcg cacatgaggc cgctgccccc gccgcaggcg ctggcggccc
61 cctcgcggtg cccgtggtga tgccatgccc cgccaccacg cgggaggaga ggagggcggc
121 gccgccgggc tctgggtgaa gagcggcgca gcggcggcgg cggcgggcgg ggggcgcttg
181 ggcagcggca tgaaggatgt ggagtcgggc cggggcaggg tgctgctgaa ctcggcagcc
241 gccaggggcg acggcctgct actgctgggc acccgcgcgg ccacgcttgg tggcggcggc
301 ggtggcctga gggagagccg ccggggcaag cagggggccc ggatgagcct gctggggaag
361 ccgctctctt acacgagtag ccagagctgc cggcgcaacg tcaagtaccg gcgggtgcag
421 aactacctgt acaacgtgct ggagagaccc cgcggctggg cgttcatcta ccacgctttc
481 gtttttctcc ttgtctttgg ttgcttgatt ttgtcagtgt tttctaccat ccctgagcac
541 acaaaattgg cctcaagttg cctcttgatc ctggagttcg tgatgattgt cgtctttggt
601 ttggagttca tcattcgaat ctggtctgcg ggttgctgtt gtcgatatag aggatggcaa
661 ggaagactga ggtttgctcg aaagcccttc tgtgttatag ataccattgt tcttatcgct
721 tcaatagcag ttgtttctgc aaaaactcag ggtaatattt ttgccacgtc tgcactcaga
781 agtctccgtt tcctacagat cctccgcatg gtgcgcatgg accgaagggg aggcacttgg
841 aaattactgg gttcagtggt ttatgctcac agcaaggaat taatcacagc ttggtacata
901 ggatttttgg ttcttatttt ttcgtctttc cttgtctatc tggtggaaaa ggatgccaat
961 aaagagtttt ctacatatgc agatgctctc tggtggggca caattacatt gacaactatt
1021 ggctatggag acaaaactcc cctaacttgg ctgggaagat tgctttctgc aggctttgca
1081 ctccttggca tttctttctt tgcacttcct gccggcattc ttggctcagg ttttgcatta
1141 aaagtacaag aacaacaccg ccagaaacac tttgagaaaa gaaggaaccc agctgccaac
1201 ctcattcagt gtgtttggcg tagttacgca gctgatgaga aatctgtttc cattgcaacc
1261 tggaagccac acttgaaggc cttgcacacc tgcagcccta ccaagaaaga acaaggggaa
1321 gcatcaagca ggtttgtgat ttctctcttg ctacatgttt gtttataaat ctgataccta
1381 ccaggtgttt taaatgtgtc tcatgtgagt aaaatcgatc aacaaataca agatgattaa
1441 aagtgacctt tcacaagatt gcctgcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaa
//