LOCUS BC050665 2040 bp mRNA linear HUM 06-JUN-2005 DEFINITION Homo sapiens leucine rich repeat containing 48, mRNA (cDNA clone MGC:60187 IMAGE:5203312), complete cds. ACCESSION BC050665 VERSION BC050665.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2040) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2040) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 110 Row: c Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 33636688. FEATURES Location/Qualifiers source 1..2040 /db_xref="H-InvDB:HIT000053546" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:60187 IMAGE:5203312" /tissue_type="Lung, Spleen, fetal, pooled" /clone_lib="NIH_MGC_122" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2040 /gene="LRRC48" /gene_synonym="DKFZP586M1120" /db_xref="GeneID:83450" CDS 237..1808 /gene="LRRC48" /gene_synonym="DKFZP586M1120" /codon_start=1 /product="LRRC48 protein" /protein_id="AAH50665.1" /db_xref="GeneID:83450" /translation="MNQPCNSMEPRVMDDDMLKLAVGDQGPQEEAGQLAKQEGILFKD VLSLQLDFRNILRIDNLWQFENLRKLQLDNNIIEKIEGLENLAHLVWLDLSFNNIETI EGLDTLVNLEDLSLFNNRISKIDSLDALVKLQVLSLGNNRIDNMMNIIYLRRFKCLRT LSLSRNPISEAEDYKMFICAYLPDLMYLDYWRIDDHTKKLAEAKHQYSIDELKHQENL MQAQLEDEQAQREELEKHKTAFVEHLNGSFLFDSMYAEDSEGNNLSYLPGVGELLETY KDKFVIICVNIFEYGLKQQEKRKTELDTFSECVREAIQENQEQGKRKIAKFEEKHLSS LSAIREELELPNIEKMILECSADISELFDALMTLEMQLVEQLEETINMFERNIVDMVG LFIENVQSLMAQCRDLENHHHEKLLEISISTLEKIVEGDLDEDLPNDLRALFVDKDTI VNAVGASHDIHLLKIDNREDELVTRINSWCTRLIDRIHKDEIMRNRKRVKEINQYIDH MQSELDNLECGDILD" BASE COUNT 566 a 518 c 538 g 418 t ORIGIN 1 gttcccagcg cttgagaagg gtcttcctat gttgcccggg ctggtcttga actcctgaac 61 tcaagcagtc cttccacctc ggcctcccaa agagctggga ttacaggtga aaattctgga 121 tctgttatct gtgaggaggc cactccgttg acagttgtgt aaaactctgc tgctttcccc 181 agctccaacc tctctggtct tcaacaacac tatcatcagg gaaaacgtgg gggaagatga 241 accagccgtg caactcgatg gagccgaggg tgatggacga tgacatgctc aagctggccg 301 tcggggacca gggcccccag gaggaggccg ggcagctggc caagcaggag ggcatcctct 361 tcaaggatgt cctgtccctg cagctggact ttcggaacat cctccgcata gacaacctct 421 ggcagtttga gaacttgagg aagctgcagc tggacaataa catcattgag aagatcgagg 481 gcctggagaa cctcgcacac ctggtctggc tggatctgtc tttcaacaac attgagacca 541 tcgaggggct ggacacactg gtgaacctgg aggacctgag cttgttcaac aaccggatct 601 ccaagatcga ctccctggac gccctcgtca agctgcaggt gttgtcgctg ggcaacaacc 661 ggattgacaa catgatgaac atcatctacc ttcggcggtt caagtgcctg cggacgctca 721 gcctctctag gaaccctatc tctgaggcag aggattacaa gatgttcatc tgtgcctacc 781 ttcctgacct catgtacctg gactactggc gcattgatga ccacacaaaa aagcttgcgg 841 aggctaagca ccagtacagc atcgacgagc tgaagcacca ggagaacctg atgcaggccc 901 agctggagga cgagcaggcg cagcgggagg agctagagaa gcacaagact gcgtttgtgg 961 aacacctgaa tggctccttc ctgtttgaca gcatgtacgc tgaggactca gagggcaaca 1021 atctgtccta cctgcctggt gtcggtgagc tccttgagac ctacaaggac aagtttgtca 1081 tcatctgcgt gaatattttt gagtatggcc tgaaacagca ggagaagcgg aaaacagagc 1141 ttgacacctt cagtgaatgt gtccgtgagg ccatccagga aaaccaggag cagggcaaac 1201 gcaagattgc caaattcgag gagaagcact tgtcgagttt aagtgccatt cgagaggagt 1261 tggaactgcc caacattgag aagatgatcc tagaatgcag tgctgacatc agtgagttgt 1321 tcgatgcgct catgacgctg gagatgcagc tggtggagca gctggaggag actataaaca 1381 tgtttgaaag gaacattgtt gacatggtag gactgtttat cgaaaatgtc caaagcctga 1441 tggctcagtg ccgggacctg gagaatcacc accacgagaa gctcctggag atctctatca 1501 gcaccctgga gaagattgtc gagggcgacc tggacgagga cctgcctaac gacctgcgcg 1561 cgctttttgt cgataaagat acgattgtta atgctgtcgg ggcatcgcac gacatccacc 1621 tcctgaagat tgacaatcga gaagatgagc tggtgaccag aatcaactct tggtgtacac 1681 gtttaataga caggattcac aaggatgaga tcatgaggaa ccgcaagcgc gtgaaggaga 1741 tcaatcagta catcgaccac atgcagagcg aactggacaa cctggaatgt ggcgacatcc 1801 tagactagat gaatgtcagc cacaggagct tcttcaaaac atagcaccag ccccagccag 1861 gagaaggaag tgcacacgcc tcacccgcac ctctagagag ttgctgggca tctctcaacc 1921 gcgatcccca acaccattct tcccccaccc ctggaaaaac ttccaaaagt agagaaaata 1981 aaggactcat ttcacatttc ccctactcat aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //