LOCUS BC050653 2019 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens nicolin 1, mRNA (cDNA clone MGC:60162 IMAGE:6015080),
complete cds.
ACCESSION BC050653
VERSION BC050653.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2019)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2019)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: h Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543288.
FEATURES Location/Qualifiers
source 1..2019
/db_xref="H-InvDB:HIT000053541"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60162 IMAGE:6015080"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2019
/gene="NICN1"
/gene_synonym="MGC12936"
/db_xref="GeneID:84276"
/db_xref="HGNC:HGNC:18317"
CDS 50..691
/gene="NICN1"
/gene_synonym="MGC12936"
/codon_start=1
/product="NICN1 protein"
/protein_id="AAH50653.1"
/db_xref="GeneID:84276"
/db_xref="HGNC:HGNC:18317"
/translation="MSRVLVPCHVKGSVALQVGDVRTSQGRPGVLVIDVTFPSVAPFE
LQEITFKNYYTAFLSIRVRQYTSAHTPAKWVTCLRDYCLMPDPHSEEGAQEYVSLFKH
QMLCDMARISELRLILRQPSPLWLSFTVEELQIYQQGPKSPSVTFPKWLSHPVPCEQP
ALLREGLPDPSRVSSEVQQMWALTEMIRASHTSARIGRFDVDGCYDLNLLSYT"
BASE COUNT 482 a 524 c 509 g 504 t
ORIGIN
1 ggtcgggggc ctagagcggc ggttgcactt agttgcggct gctgtcacca tgtcccgcgt
61 tttggtgcct tgccatgtga aaggctccgt agccctccag gtgggcgacg tgcggacctc
121 ccaaggccgg cctggcgtgc tggtcatcga tgtcaccttc cccagcgtcg ctcccttcga
181 gttgcaggaa atcacgttta agaattacta cacagctttt ttgagcatcc gtgtccgtca
241 gtacacctca gcacacacac ctgccaagtg ggtgacctgc ctgcgggact actgcctaat
301 gcctgaccca cacagtgagg agggagccca ggagtatgta tcgctgttca agcatcagat
361 gctgtgtgac atggctagaa tatcggagct acgcctgatt ctgcggcagc catcaccact
421 gtggctgtct ttcacagtgg aggagctgca gatctatcag cagggaccaa agagcccctc
481 cgtgaccttt cccaagtggc tctcccaccc agtgccctgt gagcaacctg cactcctccg
541 tgagggtctc ccagacccca gcagggtatc ctccgaggtg cagcagatgt gggcactgac
601 agagatgatc cgggccagtc acacctccgc aaggatcggc cgctttgatg tggatggctg
661 ttatgacctg aacttgctct cctacacttg aatggttgct cctagccaag atgttggcct
721 ttctgtgccc acccagactt ggtttgggcc accagaggct gaagtgtatt tcctgtgcat
781 tccaagtgtt gcctgcatgc ctgttctgtc tgggccacat tcacagattc aggattctca
841 ggggcttacc gtgttacttc agcatgagct cctggcatgg gggtgctctg tcttcgcctg
901 gctgcaactc aattcttcct tctacccaaa aacactccag tcagttgtac ttactgagaa
961 tccctgagtg ccctctgccc cttctggcaa catgcacatt cctgtcttct gcctgctccc
1021 tcatgtcagt gcagttgggc tgggctgacc tactaaaacc tgctccatgt atggacctgg
1081 aaggccattg ctgccatggc acttgggaca cttgaggaag aaacagaaac cttatttctt
1141 cctgtgtgtc ccctagtggt tttctttcca tttgtgttat gccacagaga gaaatttcct
1201 gtctgaactc ttctgctgcc tgcctaggaa ggaaacctga agatttgggc agcctgagtc
1261 tcttggtttc tgagctggct cctgaatata tgttcaagtg ggtgtgccca tagggcctgg
1321 gcacgtgtct ctagcaaaac cagggcctga gcataagaac tgggattgca ggcgtgagcc
1381 accgcgcccg gcctgcccct ttccaagaga tatgctcagc ataatgagag atcaaccgtg
1441 gtggggagtg ggtccaagta agggttctca ttgttgcctt ttaagaggcc taagtcctgc
1501 attaactcag tccaaccatt aagtgatgca ggctgctctt ccctcatgtg agaaaaacct
1561 gtttccctct ggttcttcct ggctttgcac ctggtggcta ttacaaagca gtactgcagt
1621 atgtcttgga cctggaaagt tggacatgtg tgtggctcaa cagttttctc gggggagttc
1681 agtgaccttt tggtggccac cctctgttct cacctgtgag ttcttgcagg tggcgacttc
1741 atctgcaagg tcacttacat agccccactc agctgcttcg gaaagcgtga cgaagcagta
1801 gtcctcagtg tgtgtgtaag tgaagaggac cttgtggtag cagggaccat gcttcattcg
1861 tggctgtgtc cccatctgag ggcctggtat gcaataagat caataaatac ttgtggaatg
1921 caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//