LOCUS BC050617 1345 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RD RNA binding protein, mRNA (cDNA clone MGC:60085
IMAGE:6168937), complete cds.
ACCESSION BC050617
VERSION BC050617.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1345)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1345)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC050617.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: m Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 67906819.
FEATURES Location/Qualifiers
source 1..1345
/db_xref="H-InvDB:HIT000053520_09"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60085 IMAGE:6168937"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1345
/gene="RDBP"
/gene_synonym="D6S45"
/gene_synonym="NELF-E"
/gene_synonym="RD"
/gene_synonym="RDP"
/db_xref="GeneID:7936"
/db_xref="HGNC:HGNC:13974"
/db_xref="MIM:154040"
CDS 72..1214
/gene="RDBP"
/gene_synonym="D6S45"
/gene_synonym="NELF-E"
/gene_synonym="RD"
/gene_synonym="RDP"
/codon_start=1
/product="RD RNA binding protein"
/protein_id="AAH50617.1"
/db_xref="GeneID:7936"
/db_xref="HGNC:HGNC:13974"
/db_xref="MIM:154040"
/translation="MLVIPPGLSEEEEALQKKFNKLKKKKKALLALKKQSSSSTTSQG
GVKRSLSEQPVMDTATATEQAKQLVKSGAISAIKAETKNSGFKRSRTLEGKLKDPEKG
PVPTFQPFQRSISADDDLQESSRRPQRKSLYESFVSSSDRLRELGPDGEEAEGPGAGD
GPPRSFDWGYEERSGAHSSASPPRSRSRDRSHERNRDRDRDRERDRDRDRDRDRERDR
DRDRDRDRDRERDRDRERDRDRDREGPFRRSDSFPERRAPRKGNTLYVYGEDMTPTLL
RGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQP
MLDAATGKSVWGSLAVQNSPKGCHRDKRTQIVYSDDVYKENLVDGF"
BASE COUNT 393 a 349 c 384 g 219 t
ORIGIN
1 gctatcagcg gccagcgcgg gcgcggccgg agaccgtggg gcccccggtt gccgccccct
61 cgggagccac catgttggtg ataccccccg gactgagcga ggaagaggag gctctgcaga
121 agaaattcaa caagctcaag aaaaagaaaa aggcattgct ggctctgaag aagcaaagta
181 gcagcagcac aaccagccaa ggtggtgtca aacgctcact atcagagcag cctgtcatgg
241 acacagccac agcaacagag caggcaaagc agctggtgaa gtcaggagcc atcagtgcca
301 tcaaggctga gaccaagaac tcaggcttca agcgttctcg aacccttgag gggaagttaa
361 aggaccccga gaagggacca gtccccactt tccagccgtt ccagaggagc atatctgctg
421 atgatgacct gcaagagtca tccagacgtc cccagaggaa atctctgtat gagagctttg
481 tgtcttctag tgatcgactt cgagaactag gaccagatgg agaagaggca gagggcccag
541 gggctggtga tggtccccct cgaagctttg actggggcta tgaagaacgc agtggtgccc
601 actcctcagc ctcccctccc cgaagccgca gccgggaccg cagccatgag aggaaccggg
661 acagagaccg agatcgggag cgggatcgag accgggatcg agacagagac agagagcggg
721 acagggatcg ggatcgggat cgagatcgag accgggaacg ggacagggat cgggagcggg
781 atcgagaccg agaccgagag ggtcctttcc gcaggtcgga ttcattccct gaacggcgag
841 cccctaggaa agggaatact ctctatgtat atggagaaga catgacaccc acccttctcc
901 gtggggcctt ctctcctttt ggaaacatca ttgacctctc catggaccca cccagaaact
961 gtgccttcgt cacctatgaa aagatggagt cagcagatca ggccgttgct gagctcaacg
1021 ggacccaggt ggagtctgta cagctcaaag tcaacatagc ccgaaaacag cccatgctgg
1081 atgccgctac tggcaagtct gtctggggct ccctcgctgt ccagaacagc cctaagggtt
1141 gccaccggga caagaggacc cagattgtct acagtgatga cgtctacaag gaaaaccttg
1201 tggatggctt ctagggaaca gagctggatt ccttgtgcct catatgcccc aatgctggtc
1261 tcagtaaaac actgaggtgg aagcttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaaaaaa aaaaaaaaaa aaaaa
//