LOCUS BC050614 1770 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RNA methyltransferase like 1, mRNA (cDNA clone
MGC:60073 IMAGE:5248052), complete cds.
ACCESSION BC050614
VERSION BC050614.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1770)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1770)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: d Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21359921.
FEATURES Location/Qualifiers
source 1..1770
/db_xref="H-InvDB:HIT000053518"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60073 IMAGE:5248052"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1770
/gene="RNMTL1"
/gene_synonym="FLJ10581"
/gene_synonym="HC90"
/db_xref="GeneID:55178"
/db_xref="HGNC:HGNC:18485"
CDS 9..1271
/gene="RNMTL1"
/gene_synonym="FLJ10581"
/gene_synonym="HC90"
/codon_start=1
/product="RNA methyltransferase like 1"
/protein_id="AAH50614.1"
/db_xref="GeneID:55178"
/db_xref="HGNC:HGNC:18485"
/translation="MAALVRPSRFVVRPLLQVVQAWDLDARRWVRALRRSPVKVVFPS
GEVVEQKRAPGKQPRKAPSEASAQEQREKQPLEESASRAPSTWEESGLRYDKAYPGDR
RLSSVMTIVKSRPFREKQGKILLEGRRLISDALKAGAVPKMFFFSRLEYLKELPVDKL
KGVSLIKVKFEDIKDWSDLVTPQGVMGIFAKPDHVKMTYPKTQLQHSLPLLLICDNLR
DPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFRMPIINNLEWETVPN
YLPPDTRVYVADNCGLYAQAEMSNKASDHGWVCDQRVMKFHKYEEEEDVETGASQDWL
PHVEVQSYDSDWTEAPAAVVIGGETYGVSLESLQLAESTGGKRLLIPVVPGVDSLNSA
MAASILLFEGKRQLRGRAEDLSRDRSYH"
BASE COUNT 470 a 410 c 518 g 372 t
ORIGIN
1 cagggaacat ggcggcgctg gtgagaccct cgaggtttgt cgtgcgaccg ttgctgcagg
61 tggtccaggc ttgggacctt gacgcgaggc gctgggtccg ggcgctgcgg cggagcccag
121 tgaaagtggt gtttccttcc ggagaggtgg tggaacagaa gcgcgctcct gggaagcagc
181 cccgcaaggc accatctgag gccagtgccc aggagcaacg agagaaacaa ccgctcgagg
241 agtccgcatc ccgcgctccc agcacctggg aagagtctgg gcttcgctac gataaagctt
301 atcccgggga caggaggctg agcagtgtaa tgacaatagt aaagtccagg ccatttcggg
361 aaaaacaagg gaagatcctg ctggaaggtc gcaggctcat ttcagacgct ctcaaggctg
421 gagctgtgcc aaaaatgttc ttctttagcc gtctagaata cctaaaggag ttgccagtcg
481 ataagctgaa aggtgtcagc ctcattaagg tgaaatttga ggatatcaag gattggtccg
541 acctcgtaac gccacaagga gtaatgggga tttttgccaa gcctgaccat gttaagatga
601 catatccaaa gactcagctt cagcattcac tgcctttatt attgatttgt gacaatctcc
661 gtgaccctgg gaacctgggg acaattctga gatctgcagc tggggcaggc tgcagcaaag
721 tgttactcac caaaggctgt gtggatgcct gggagcccaa agtgctccgg gcgggtatgg
781 gcgcacattt ccggatgccc attatcaata atctggaatg ggaaaccgtg cccaattacc
841 tgccccctga cactcgggtc tatgtggctg acaactgtgg cctttatgcc caggctgaga
901 tgtctaataa agctagtgac catggctggg tgtgtgatca acgagtgatg aagtttcaca
961 agtatgagga agaggaagat gtagaaaccg gagccagtca agattggctg cctcatgttg
1021 aggttcagag ttacgactcg gactggacag aggcgccggc agctgtggtg attggcgggg
1081 agacctacgg cgtgagcctg gagtccctgc agctggccga gagcactggt ggcaagaggc
1141 tgctgatccc cgttgtgcct ggtgtggaca gcctcaactc ggccatggcg gcaagcatcc
1201 tgcttttcga agggaaaaga cagctgcggg ggagggcgga ggacttgagc agggacagga
1261 gttaccactg aggacgcaga agtgacttct gcttgaggac gtctgcagct cctcctacac
1321 cagcacactg gtgggaggct ggcggagtca gtgactatgg cccccacgtt caggaggaag
1381 gtgtgatgcc gtcatacagt tacaggaaaa ataagaactt cctcagaaag aacaggtccg
1441 aattcttcct gtcgcgtcac tgattttgag gttctttttt ctcttggtga caataggtga
1501 cccacgtggc tctgtgtgtt tttaaaaatt gtccaccaag aagcactttg tgcccagaaa
1561 gttcctgaag catcatcctg gcagggaggc gcctgctcca ccagctggtg ggtgtttgta
1621 atcgccaagc accagctata ggtcacagcc acatcactca cagctgatca ctggttggtg
1681 gaaaataaac tatgagcagc agattacgtt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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