LOCUS BC050612 1990 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens inhibitor of kappa light polypeptide gene enhancer in
B-cells, kinase gamma, mRNA (cDNA clone MGC:60070 IMAGE:6062527),
complete cds.
ACCESSION BC050612
VERSION BC050612.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1990)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1990)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC050612.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 110 Row: i Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361093.
FEATURES Location/Qualifiers
source 1..1990
/db_xref="H-InvDB:HIT000053517"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:60070 IMAGE:6062527"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1990
/gene="IKBKG"
/gene_synonym="FIP-3"
/gene_synonym="FIP3"
/gene_synonym="Fip3p"
/gene_synonym="IKK-gamma"
/gene_synonym="IP"
/gene_synonym="IP2"
/gene_synonym="NEMO"
/db_xref="GeneID:8517"
/db_xref="MIM:300248"
CDS 148..1407
/gene="IKBKG"
/gene_synonym="FIP-3"
/gene_synonym="FIP3"
/gene_synonym="Fip3p"
/gene_synonym="IKK-gamma"
/gene_synonym="IP"
/gene_synonym="IP2"
/gene_synonym="NEMO"
/codon_start=1
/product="IKBKG protein"
/protein_id="AAH50612.1"
/db_xref="GeneID:8517"
/db_xref="MIM:300248"
/translation="MNRHLWKSQLCEMVQPSGGPAADQDVLGEESPLGKPAMLHLPSE
QGAPETLQRCLEENQELRDAIRQSNQILRERCEELLHFQASQREEKEFLMCKFQEARK
LVERLGLEKLDLKRQKEQALREVEHLKRCQQQMAEDKASVKAQVTSLLGELQESQSRL
EAATKECQALEGRARAASEQARQLESEREALQQQHSVQVDQLRMQGQSVEAALRMERQ
AASEEKRKLAQLQVAYHQLFQEYDNHIKSSVVGSERKRGMQLEDLKQQLQQAEEALVA
KQEVIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERQAREKLAEKKELLQEQLE
QLQREYSKLKASCQESARIEDMRKRHVEVSQAPLPPAPAYLSSPLALPSQRRSPPEEP
PDFCCPKCQYQAPDMDTLQIHVMECIE"
BASE COUNT 420 a 584 c 642 g 344 t
ORIGIN
1 gacaccggaa gccggaagcg tggtagggaa gggcgaccgc gaaactggga ctttctcgga
61 gcgccggggc ccttccagcg ttcacagtcc gccgctccca cccttctcac gtctgacgga
121 ctctgctgac agcccttgcc ctgttggatg aataggcacc tctggaagag ccaactgtgt
181 gagatggtgc agcccagtgg tggcccggca gcagatcagg acgtactggg cgaagagtct
241 cctctgggga agccagccat gctgcacctg ccttcagaac agggcgctcc tgagaccctc
301 cagcgctgcc tggaggagaa tcaagagctc cgagatgcca tccggcagag caaccagatt
361 ctgcgggagc gctgcgagga gcttctgcat ttccaagcca gccagaggga ggagaaggag
421 ttcctcatgt gcaagttcca ggaggccagg aaactggtgg agagactcgg cctggagaag
481 ctcgatctga agaggcagaa ggagcaggct ctgcgggagg tggagcacct gaagagatgc
541 cagcagcaga tggctgagga caaggcctct gtgaaagccc aggtgacgtc cttgctcggg
601 gagctgcagg agagccagag tcgcttggag gctgccacta aggaatgcca ggctctggag
661 ggtcgggccc gggcggccag cgagcaggcg cggcagctgg agagtgagcg cgaggcgctg
721 cagcagcagc acagcgtgca ggtggaccag ctgcgcatgc agggccagag cgtggaggcc
781 gcgctccgca tggagcgcca ggccgcctcg gaggagaaga ggaagctggc ccagttgcag
841 gtggcctatc accagctctt ccaagaatac gacaaccaca tcaagagcag cgtggtgggc
901 agtgagcgga agcgaggaat gcagctggaa gatctcaaac agcagctcca gcaggccgag
961 gaggccctgg tggccaaaca ggaggtgatc gataagctga aggaggaggc cgagcagcac
1021 aagattgtga tggagaccgt tccggtgctg aaggcccagg cggatatcta caaggcggac
1081 ttccaggctg agaggcaggc ccgggagaag ctggccgaga agaaggagct cctgcaggag
1141 cagctggagc agctgcagag ggagtacagc aaactgaagg ccagctgtca ggagtcggcc
1201 aggatcgagg acatgaggaa gcggcatgtc gaggtctccc aggccccctt gccccccgcc
1261 cctgcctacc tctcctctcc cctggccctg cccagccaga ggaggagccc ccccgaggag
1321 ccacctgact tctgctgtcc caagtgccag tatcaggccc ctgatatgga caccctgcag
1381 atacatgtca tggagtgcat tgagtagggc cggccagtgc aaggccactg cctgccgagg
1441 acgtgcccgg gaccgtgcag tctgcgcttt cctctcccgc ctgcctagcc caggatgaag
1501 ggctgggtgg ccacaactgg gatgccacct ggagccccac ccaggagctg gccgcggcac
1561 cttacgcttc agctgttgat ccgctggtcc cctcttttgg ggtagatgcg gccccgatca
1621 ggcctgactc gctgctcttt ttgttccctt ctgtctgctc gaaccacttg cctcgggcta
1681 atccctccct cttcctccac ccggcactgg ggaagtcaag aatggggcct ggggctctca
1741 gggagaactg cttcccctgg cagagctggg tggcagctct tcctcccacc ggacaccgac
1801 ccgcccgctg ctgtgccctg ggagtgctgc cctcttacca tgcacacggg tgctctcctt
1861 ttgggctgca tgctattcca ttttgcagcc agaccgatgt gtatttaacc agtcactatt
1921 gatggacatt tgggttgttt cccatctttt tgttaccata aataatggca tagtaaaaaa
1981 aaaaaaaaaa
//