LOCUS BC050588 3595 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens melanoma antigen family E, 1, mRNA (cDNA clone
MGC:57856 IMAGE:6189864), complete cds.
ACCESSION BC050588
VERSION BC050588.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3595)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3595)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: n Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20143481.
FEATURES Location/Qualifiers
source 1..3595
/db_xref="H-InvDB:HIT000053505"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57856 IMAGE:6189864"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3595
/gene="MAGEE1"
/gene_synonym="DAMAGE"
/gene_synonym="HCA1"
/gene_synonym="KIAA1587"
/db_xref="GeneID:57692"
/db_xref="HGNC:HGNC:24934"
CDS 160..3033
/gene="MAGEE1"
/gene_synonym="DAMAGE"
/gene_synonym="HCA1"
/gene_synonym="KIAA1587"
/codon_start=1
/product="melanoma antigen family E, 1"
/protein_id="AAH50588.1"
/db_xref="GeneID:57692"
/db_xref="HGNC:HGNC:24934"
/translation="MSLVSQNSRRRRRRVAKATAHNSSWGEMQAPNAPGLPADVPGSD
VPQGPSDSQILQGLCASEGPSTSVLPTSAEGPSTFVPPTISEASSASGQPTISEGPGT
SVLPTPSEGLSTSGPPTISKGLCTSVTLAASEGRNTSRPPTSSEEPSTSVPPTASEVP
STSLPPTPGEGTSTSVPPTAYEGPSTSVVPTPDEGPSTSVLPTPGEGPGTSVPLAATE
GLSTSVQATPDEGPSTSVPPTATEGLSTPVPPTRDEGPSTSVPATPGEGPSTSVLPAA
SDGQSISLVPTRGKGSSTSVPPTATEGLSTSVQPTAGEGSSTSVPPTPGGGLSTSVPP
TATEDLSTSVPPTPGEGPSTSVLPIPGEGLSTSVPPTASDGSDTSVPPTPGEGASTLV
QPTAPDGPGSSVLPNPGEGPSTLFSSSASVDRNPSKCSLVLPSPRVTKASVDSDSEGP
KGAEGPIEFEVLRDCESPNSISIMGLNTSRVAITLKPQDPMEQNVAELLQFLLVKDQS
KYPIRESEMREYIVKEYRNQFPEILRRAAAHLECIFRFELRELDPEAHTYILLNKLGP
VPFEGLEESPNGPKMGLLMMILGQIFLNGNQAKEAEIWEMLWRMGVQRERRLSIFGNP
KRLLSVEFVWQRYLDYRPVTDCKPVEYEFFWGPRSHLETTKMKILKFMAKIYNKDPMD
WPEKYNEALEEDAARAFAEGWQALPHFRRPFFEEAAAEVPSPDSEVSSYSSKYAPHSW
PESRLESKARKLVQLFLLMDSTKLPIPKKGILYYIGRECSKVFPDLLNRAARTLNHVY
GTELVVLDPRNHSYTLYNRREMEETEEIVDSPNRPGNNFLMQVLSFIFIMGNHARESA
VWAFLRGLGVQAGRKHVITCRYLSQRYIDSLRVPDSDPVQYEFVWGPRARLETSKMKA
LRYVARIHRKEPQDWPQQYREAMEDEANRADVGHRQIFVHNFR"
BASE COUNT 850 a 1003 c 933 g 809 t
ORIGIN
1 ttcagcagtt gcttggaact ttggttctgg cagcagcagc aacatcatta ccgctagcgg
61 cagttttgtg ccgaggcacc tacacacctc ccgtcctctc tgccagatcg cgggcctgtc
121 ggtgtctgct cctacacgcc aacgccggtg ggcaggacca tgtctctggt aagccagaat
181 tcgcgccgcc gccgccgccg cgttgcaaag gctactgcgc acaacagcag ctggggcgaa
241 atgcaggccc ctaatgcccc cggtctcccc gctgatgtgc caggctcaga cgtcccccag
301 ggtcccagcg attcccagat cctccagggc ctctgcgcct ctgagggccc aagcacctcc
361 gttctgccca cctccgctga gggccccagc acctttgtgc cgcccaccat ctctgaggcc
421 tcaagcgcct ccgggcagcc caccatctct gagggacctg gcacctccgt gctgcccacc
481 cccagtgagg gcctaagcac ctccgggcct cccaccatct ctaaggggct gtgcacctct
541 gtgacgcttg ccgcctctga gggccggaac acctccaggc cgcccacttc ctctgaggaa
601 cctagcacct ccgtgccgcc caccgcctct gaggtaccga gcacctccct gccgcccacc
661 cctggtgagg gaacgagcac ctccgtgccg cccacagcct atgagggacc aagcacctcc
721 gtggtgccca cccctgatga gggaccaagc acctccgtgc tgcctacacc tggtgaggga
781 ccaggcacct ccgtgccgct cgccgccact gagggcctga gcacctccgt gcaggccact
841 cctgatgagg gaccgagcac ctccgtgccg cccaccgcca ctgagggcct aagcaccccc
901 gtgccaccca cccgtgatga gggaccgagc acctccgtgc cggccactcc tggtgaggga
961 ccgagcacct ccgtgctgcc cgccgcctct gacggacaaa gcatctcctt ggtgcccacc
1021 cgcggtaagg gatcaagcac ctccgtgccc cccaccgcca ccgagggcct gagcacctcc
1081 gtgcagccca ctgctggtga gggatcgagc acctccgtgc cgcccacccc tggtggggga
1141 ctgagcacct ccgtgccgcc caccgccact gaggacttga gcacctccgt gccgcccact
1201 cccggtgagg gaccaagcac ttccgtactg ccaatccccg gtgagggact gagcacctct
1261 gtgccgccca ccgcctctga tggatcggac acctccgtgc cgcccactcc tggtgagggc
1321 gcaagcacct tagtgcagcc caccgcccct gacggaccgg gaagctccgt gctgcctaac
1381 cctggtgagg gcccgagcac attgtttagc tctagtgctt ctgtggaccg gaacccctcc
1441 aagtgttccc ttgttttgcc aagccctagg gtaaccaagg cctccgtgga ctcagattct
1501 gagggtccta agggtgcaga aggccctata gaattcgagg tcctgagaga ctgtgagagc
1561 cccaactcca ttagtattat gggcctcaat acttcccggg ttgcaattac cctgaagccc
1621 caagacccta tggaacagaa cgtagctgag ctgttgcagt tcctgctggt gaaggatcag
1681 agcaagtacc ctatccggga gtctgaaatg cgggaatata ttgttaaaga atatcgcaac
1741 cagtttcctg agatactcag gcgagcagca gcccacctgg agtgcatttt taggtttgaa
1801 ttgagagaac ttgaccctga ggcacacacc tacattctgt taaacaaact gggacctgtg
1861 ccctttgaag ggttagaaga gagcccaaat gggccaaaga tgggcctcct gatgatgatt
1921 ctaggccaaa tattcctgaa tggcaaccaa gccaaggagg ctgagatttg ggaaatgctc
1981 tggaggatgg gggtgcagcg ggaaaggagg ctttccattt ttgggaaccc aaagagactt
2041 ctgtctgtgg agtttgtatg gcagcgttac ttagactaca ggccagtaac tgactgtaaa
2101 ccagtggagt atgagttttt ctggggccca agatcccacc tagaaaccac caagatgaaa
2161 attctgaagt tcatggcgaa aatatataac aaagatccta tggattggcc agagaaatac
2221 aacgaagctc tggaagaaga tgctgccaga gcctttgctg agggttggca ggctctccct
2281 cactttagga ggcccttttt tgaggaagct gctgcagagg taccatcccc tgattcagag
2341 gtttccagct attcctcaaa atatgcccca cattcatggc ctgagtcaag attggagagc
2401 aaggcaagga agctggtgca gttatttctg cttatggatt caactaagct gcctatacca
2461 aagaaaggaa ttctgtacta cattggccga gagtgcagca aagtgttccc tgacctcctg
2521 aatcgtgctg cccgcaccct gaaccatgtc tatgggacag aactagtggt acttgatccc
2581 aggaatcact cctatactct gtacaaccga agggagatgg aagaaactga ggagatcgta
2641 gacagtccaa acaggcctgg caacaacttt ttgatgcagg tcctaagctt catctttatt
2701 atgggcaacc atgccaggga gtctgcagtc tgggcctttc tgcggggctt aggggttcaa
2761 gctgggagaa agcatgtgat tacctgcaga tacttgagtc agcgctatat agacagttta
2821 cgggttcctg acagtgatcc agtgcaatat gagtttgtat ggggtcctag agcccgtttg
2881 gaaacctcta agatgaaagc cttgcgatat gtggccagaa tccacagaaa ggaaccacag
2941 gactggccac agcagtacag ggaggcaatg gaagatgagg ccaatagagc tgatgttggg
3001 cacaggcaaa tctttgttca caacttcagg tagaggaatg catggcagtc agaggggcct
3061 tgcaaggagg ggcctttgag cctcagttct catgtattgg ggggtggggg tgggtacata
3121 ttgtatttgg tatttgtgtt ccagttatat ttatgtcttt tcatatttag ttctggtgtg
3181 gtgtctggaa atgtttcaac tgttttaata tattgtctga ttgggtaaat gtgattgacc
3241 acttgctgtc tctgttgtat tttggtatga gttttgatag ctctataaaa tgttttggaa
3301 atctttccat cttgttgcat tatctagaaa agaatatagc atatagctat agatataggc
3361 ttttccttga aagcttgaaa aaaattcgcc agtaaaataa tctagcttaa agtgataaac
3421 taacaaacaa atataacaac aactgaaaag gcactctaaa ttgtggctgg cttccctttc
3481 tgtctgctat tgtatgaaga atactgatgt ttacctgtat ttgctttgct gtactaaaat
3541 gtaatgaaaa ataaaagatt aataaatgaa acataatgct aaaaaaaaaa aaaaa
//