LOCUS BC050536 2022 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens integrator complex subunit 8, mRNA (cDNA clone
IMAGE:5535173), partial cds.
ACCESSION BC050536
VERSION BC050536.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2022)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2022)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 107 Row: f Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923495.
FEATURES Location/Qualifiers
source 1..2022
/db_xref="H-InvDB:HIT000099217"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5535173"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2022
/gene="INTS8"
/gene_synonym="FLJ20530"
/gene_synonym="INT8"
/gene_synonym="MGC131633"
/db_xref="GeneID:55656"
/db_xref="HGNC:HGNC:26048"
CDS <1..1924
/gene="INTS8"
/gene_synonym="FLJ20530"
/gene_synonym="INT8"
/gene_synonym="MGC131633"
/codon_start=2
/product="INTS8 protein"
/protein_id="AAH50536.1"
/db_xref="GeneID:55656"
/db_xref="HGNC:HGNC:26048"
/translation="FRQSVLRELFKKAQQGNEALDEICFKVCACNTVRDILEGRTISV
QFNQLFLRPNKEKIDFLLEVCSRSVNLEKASESLKGNMAAFLKNVCLGLEDLQYVFMI
SSHELFITLLKDEERKLLVDQMRKRSPRVNLCIKPVTSFYDIPASASVNIGQLEHQLI
LSVDPWRIRQILIELHGMTSERQFWTVSNKWEVPSVYSGVILGIKDNLTRDLVYILMA
KGLHCSTVKDFSHAKQLFAACLELVTEFSPKLRQVMLNEMLLLDIHTHEAGTGQAGER
PPSDLISRVRGYLEMRLPDIPLRQVIAEECVAFMLNWRENEYLTLQVPAFLLQSNPYV
KLGQLLAATCKELPGPKESRRTAKDLWEVVVQICSVSSQHKRGNDGRVSLIKQRESTL
GIMYRSELLSFIKKLREPLVLTIILSLFVKLHNVREDIVNDITAEHISIWPSSIPNLQ
SVDFEAVAITVKELVRYTLSINPNNHSWLIIQADIYFATNQYSAALHYYLQAGAVCSD
FFNKAVPPDVYTDQVIKRMIKCCSLLNCHTQVAILCQFLREIDYKTAFKSLQEQNSHD
AMDSYYDYIWDVTILEYLTYLHHKRGETDKRQIAIKAIGQTELNASNPEEVLQLAAQR
RKKVSPSNGKTLLLSS"
BASE COUNT 647 a 359 c 412 g 604 t
ORIGIN
1 gttccgacag tcagtcctaa gagaactctt taagaaagct caacagggaa atgaagctct
61 agatgaaatc tgttttaaag tttgtgcctg taatacagtc cgtgatatac tggaaggcag
121 aacaattagt gttcaattta accagctatt tcttagacca aataaagaga aaatagactt
181 tcttcttgag gtatgttcaa gatcagtaaa tttagaaaaa gcttcagagt ctttgaaagg
241 aaacatggct gcttttctaa agaatgtgtg tctggggttg gaagatctgc agtatgtttt
301 catgatttct tcacatgagc ttttcattac attgttgaaa gatgaagaac gaaagctact
361 tgttgatcag atgaggaaga gatcccctag agtaaatctg tgcattaaac ctgtaacttc
421 attttatgat atcccagctt cagcaagtgt caacattggt cagttagagc atcaacttat
481 attgtcagtg gatccttgga ggattagaca aattttaatt gaattacatg gtatgacttc
541 agagcgccag ttctggacag tgtctaataa gtgggaagta ccttctgtct atagtggtgt
601 tatcctggga attaaagaca atttaacaag agatttggtt tatattctta tggccaaagg
661 tttgcactgc agtactgtta aggacttttc ccatgctaaa cagctctttg ctgcttgttt
721 ggagttggta acagagttct caccgaagct tcgtcaggtc atgctgaatg agatgttgct
781 tttggatatt catacacacg aagctgggac agggcaggca ggagagagac cgccatccga
841 ccttataagt agagtacgag gctatctgga aatgaggctt cctgatattc ctcttcgtca
901 agttatagct gaggaatgtg ttgcctttat gttaaactgg agagaaaatg aataccttac
961 actccaagtt cctgcatttt tgcttcagag taatccatat gtaaagcttg gacagctttt
1021 agcagctaca tgcaaagaac ttccaggccc taaagaaagc agacggactg ccaaagacct
1081 ttgggaagtt gttgttcaaa tctgtagtgt gtccagtcag cacaaacgag gaaatgatgg
1141 cagagttagt ttaataaaac agagggaatc tacgttaggt atcatgtatc ggagtgaact
1201 gctttctttt atcaaaaaat tacgagaacc actcgttttg actattattt tatcactctt
1261 tgtgaaactt cacaatgttc gggaggacat tgtgaatgat attacagctg aacacatttc
1321 tatttggcca tcttccattc ccaacctcca gtctgtggac tttgaagctg tggcaatcac
1381 agtgaaagag ctagttcgat atacactcag tataaatcca aataaccatt cttggttaat
1441 tatccaggca gatatttact ttgcaacgaa tcagtattca gcagctcttc actattacct
1501 ccaggcagga gctgtgtgtt ctgacttctt taacaaggct gtgccccctg atgtttatac
1561 agaccaggta ataaaacgaa tgataaaatg ttgttctttg ctgaattgcc acacacaggt
1621 ggctatttta tgtcagttcc tcagagaaat tgactacaaa acagcgttta aatctctgca
1681 agaacaaaac agtcatgatg ctatggactc ctactacgac tacatatggg atgttaccat
1741 tttggaatac ttgacttatc ttcatcataa aagaggagaa acagataaaa gacaaattgc
1801 aatcaaagcc atcggccaga cagagttgaa tgcaagcaat ccagaagaag tgttacagct
1861 ggcagcgcag agaaggaaaa aagtttctcc aagcaatggc aaaactttac ttttaagcag
1921 ttaaattttt ttaactttta ttttttaaac aatgggctaa aaataaacag tattaaaagg
1981 ttaagtttat ataatacata tgtacacaaa aaaaaaaaaa aa
//