LOCUS BC050438 2148 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens vacuolar protein sorting 28 homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:5770193), with apparent retained intron. ACCESSION BC050438 VERSION BC050438.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2148) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2148) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 98 Row: h Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34452692 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..2148 /db_xref="H-InvDB:HIT000099196" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5770193" /tissue_type="Brain, fetal, whole pooled" /clone_lib="NIH_MGC_121" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" BASE COUNT 460 a 666 c 677 g 345 t ORIGIN 1 cccggcgcca tcttcccgac cgcgagccgt ccaggtctca gtgctgtgcc ccccccagag 61 cctagaggat gtttcatggg atcccagcca cgccgggcat aggagcccct gggaacaagc 121 cggagctgta tgaggtgagt ggtgggtgcc cacccggccg gcattggcca acagcaaatg 181 cctgtgtggc ctcaccaggg tcctgcagcc cctgttggca ctggcccaca gagcccgctc 241 tctccggcag gaagtgaagt tgtacaagaa cgcccgggag agggagaagt aagtccaggc 301 gcccaggctg tcccaacaca cccatgcgca tctggctgcc ctggggcagc ccctccagac 361 ccaccccaaa ctgaggggtg ggaggacgca gggtcagtct ggggaactgt tcctgaggca 421 ctccaggatg gagcgagagg tgggcagagc gcccgcagtg gcacctccgg gcagggggta 481 gcactctggg ctctaggctt ggcaccccgg ggcctggccc gatagacagg tgtgtcctca 541 ggtacgacaa catggcagag ctgtttgcgg tggtaaagac aatgcaagcc ctggagaagg 601 cctacatcaa ggactgtgtc tcccccagcg agtacactgc agcctgctcc cggctcctgg 661 tccaatacaa agctgccttc aggcaggtcc agggctcaga aatcagctct attgacgaat 721 tctgccgcaa gttccgcgtg agtgcctggt ccttccaccc ccatggggcg agactgtcgg 781 gcatgggtat ggggtgccag agggctctgg ccacctgggg cttgctgtcc tgagagcccc 841 agcacccatg tcacccccaa cagctggact gcccgctggc catggagcgg atcaaggagg 901 accggcccat caccatcaag gacgacaagg gcaacctcaa ccgctgcatc gcagacgtgg 961 tctcggtgcg ccccagcccc cagggcacgt ggttaggaga gccgaggctg cctgctgcag 1021 ctgggcacga gcgtagggtc ctgggcctcc agagctgagc agcactctga cttgctgggc 1081 agaagggaac ccctttaact aggaatgagg ggtgggcagc atgcggggac gcccccaggc 1141 cacctggact cctgtcgggg ggatgagcac agggtgcgtt ctggcggggt cctggcctcg 1201 ggagagagtg tgggtgtggg cccacccttc agttcccaca cagctgtctg ggcagccagg 1261 acctcgttca cccaggaggc ctgcagggtt tgggaacaga gtacagtgag gaggcccaag 1321 tgacagctgt ggctgaggag gggttggggc ccgtgagccg tggggcctcc cgcacccgtg 1381 gacacgcgag cctcatgtgc acacctgccc ccagctcttc atcacggtca tggacaagct 1441 gcgcctggag atccgcgcca tggatgaggt gcgggtattg ggctggcagg gggcctaggc 1501 aggaggggat ggagccggcg tcggggtccc agccgctgtg tgtgtctcag atccagcccg 1561 acctgcgaga gctgatggag accatgcacc gcatgagcca cctcccaccc gactttgagg 1621 gccgccagac ggtcagccag tggtgggtgt ccctcccagc caggcagagc cccgcagtgc 1681 ccgagaccct cccagccagg cggagccccg cagtgcccct gaggccctca gcccccacat 1741 gccctgtgct gcactcccag gctgcagacc ctgagcggca tgtcggcgtc agatgagctg 1801 gacgactcac aggtgcgtca gatgctgttc gacctggagt cagcctacaa cgccttcaac 1861 cgcttcctgc atgcctgagc ccggggcact agcccttgca cagaagggca gagtctgagg 1921 cgatggctcc tggtcccctg tccgccacac aggccgtggt catccacaca actcactgtc 1981 tgcagctgcc tgtctggtgt ctgtctttgg tgtcagaact ttgggggccg ggcccctccc 2041 cacaataaag atgctctccg accttcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2101 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //