LOCUS BC050435 1852 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens secreted frizzled-related protein 5, mRNA (cDNA clone
MGC:54179 IMAGE:6189478), complete cds.
ACCESSION BC050435
VERSION BC050435.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1852)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1852)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: l Column: 6.
FEATURES Location/Qualifiers
source 1..1852
/db_xref="H-InvDB:HIT000099195"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54179 IMAGE:6189478"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1852
/gene="SFRP5"
/gene_synonym="SARP3"
/db_xref="GeneID:6425"
/db_xref="HGNC:HGNC:10779"
/db_xref="MIM:604158"
CDS 124..1077
/gene="SFRP5"
/gene_synonym="SARP3"
/codon_start=1
/product="secreted frizzled-related protein 5"
/protein_id="AAH50435.2"
/db_xref="GeneID:6425"
/db_xref="HGNC:HGNC:10779"
/db_xref="MIM:604158"
/translation="MRAAAAAGGVRTAALALLLGALHWAPARCEEYDYYGWQAEPLHG
RSYSKPPQCLDIPADLPLCHTVGYKRMRLPNLLEHESLAEVKQQASSWLPLLAKRCHS
DTQVFLCSLFAPVCLDRPIYPCRSLCEAVRAGCAPLMEAYGFPWPEMLHCHKFPLDND
LCIAVQFGHLPATAPPVTKICAQCEMEHSADGLMEQMCSSDFVVKMRIKEIKIENGDR
KLIGAQKKKKLLKPGPLKRKDTKRLVLHMKNGAGCPCPQLDSLAGSFLVMGRKVDGQL
LLMAVYRWDKKNKEMKFAVKFMFSYPCSLYYPFFYGAAEPH"
BASE COUNT 348 a 582 c 572 g 350 t
ORIGIN
1 ctccgcggcg gcggcggcgg cggctgggta gagtcagggc cgggggcgca cgccggaaca
61 cctgggccgc cgggcaccga gcgtcggggg gctgcgcggc gcgcacctgg agagggcgca
121 gccatgcggg cggcggcggc ggcggggggc gtgcggacgg ccgcgctggc gctgctgctg
181 ggggcgctgc actgggcgcc ggcgcgctgc gaggagtacg actactatgg ctggcaggcc
241 gagccgctgc acggccgctc ctactccaag ccgccgcagt gccttgacat ccctgccgac
301 ctgccgctct gccacacggt gggctacaag cgcatgcggc tgcccaacct gctggagcac
361 gagagcctgg ccgaagtgaa gcagcaggcg agcagctggc tgccgctgct ggccaagcgc
421 tgccactcgg atacgcaggt cttcctgtgc tcgctctttg cgcccgtctg tctcgaccgg
481 cccatctacc cgtgccgctc gctgtgcgag gccgtgcgcg ccggctgcgc gccgctcatg
541 gaggcctacg gcttcccctg gcctgagatg ctgcactgcc acaagttccc cctggacaac
601 gacctctgca tcgccgtgca gttcgggcac ctgcccgcca ccgcgcctcc agtgaccaag
661 atctgcgccc agtgtgagat ggagcacagt gctgacggcc tcatggagca gatgtgctcc
721 agtgactttg tggtcaaaat gcgcatcaag gagatcaaga tagagaatgg ggaccggaag
781 ctgattggag cccagaaaaa gaagaagctg ctcaagccgg gccccctgaa gcgcaaggac
841 accaagcggc tggtgctgca catgaagaat ggcgcgggct gcccctgccc acagctggac
901 agcctggcgg gcagcttcct ggtcatgggc cgcaaagtgg atggacagct gctgctcatg
961 gccgtctacc gctgggacaa gaagaataag gagatgaagt ttgcagtcaa attcatgttc
1021 tcctacccct gctccctcta ctaccctttc ttctacgggg cggcagagcc ccactgaagg
1081 gcactcctcc ttgccctgcc agctgtgcct tgcttgccct ctggccccgc cccaacttcc
1141 aggctgaccc ggccctactg gagggtgttt tcacgaatgt tgttactggc acaaggccta
1201 agggatgggc acggagccca ggctgtcctt tttgacccag gggtcctggg gtccctggga
1261 tgttgggctt cctctctcag gagcagggct tcttcatctg ggtgaagacc tcagggtctc
1321 agaaagtagg caggggagga gagggtaagg gaaaggtgga ggggctcagg gcaccctgag
1381 gcggaggttt cagagtagaa ggtgatgtca gctccagctc ccctctgtcg gtggtggggc
1441 ctcaccttga agagggaagt ctcaatatta ggctaagcta tttgggaaag ttctccccac
1501 cgcccctgta cgcgtcatcc tagcccccct taggaaagga gttagggtct cagtgcctcc
1561 agccacaccc cctgccttcc ccagcttgcc catttccctg ccccaaggcc cagagctccc
1621 cccagactgg agagcaagcc cagcccagcc tcggcataga cccccttctg gtccgcccgt
1681 ggctcgattc ccgggattca ttcctcagcc tctgcttctc ccttttatcc caataagtta
1741 ttgctactgc tgtgaggcca taggtactag acaaccaata catgcagggt tgggttttct
1801 aattttttta actttttaat taaatcaaag aaaacaaaaa aaaaaaaaaa aa
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