LOCUS BC050389 3941 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens mahogunin, ring finger 1, mRNA (cDNA clone MGC:51963 IMAGE:5755971), complete cds. ACCESSION BC050389 VERSION BC050389.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3941) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3941) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 98 Row: f Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 44917607. FEATURES Location/Qualifiers source 1..3941 /db_xref="H-InvDB:HIT000053435" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:51963 IMAGE:5755971" /tissue_type="Blood, adult leukocytes" /clone_lib="NIH_MGC_118" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3941 /gene="MGRN1" /gene_synonym="CD41B" /gene_synonym="GP2B" /gene_synonym="ITGA2B" /gene_synonym="KIAA0544" /gene_synonym="RNF156" /db_xref="GeneID:23295" /db_xref="HGNC:HGNC:20254" /db_xref="MIM:607559" CDS 110..1840 /gene="MGRN1" /gene_synonym="CD41B" /gene_synonym="GP2B" /gene_synonym="ITGA2B" /gene_synonym="KIAA0544" /gene_synonym="RNF156" /codon_start=1 /product="mahogunin, ring finger 1" /protein_id="AAH50389.1" /db_xref="GeneID:23295" /db_xref="HGNC:HGNC:20254" /db_xref="MIM:607559" /translation="MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKF DTPHPEGYLFGENMDLNFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKD DADSPTEDGDKPRVLYSLEFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSET VHYKRGVSQQFSLPSFKIDFSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAH VLLAAFEKHMDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSN ECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIRAVRKKPG ALSPVSFSPVLAQSLEHDEHSCPFKKSKPHPASLASKKPKRETNSDSVPPGYEPISLL EALNGLRAVSPAIPSAPLYEEITYSGISDGLSQASCPLAAIDHILDSSRQKGRPQSKA PDSTLRSPSSPIHEEDEEKLSEDVDAPPPLGGAELALRESSSPESFITEEVDESSSPQ QGTRAASIENVLQDSSPEHCGRGPPADIYLPGRPTSMETAHGLATTSPTWPPLGGPSP DPSAAELTPL" BASE COUNT 748 a 1322 c 1091 g 780 t ORIGIN 1 tggacgagcg tccgtgcggc ctggtccggg ccatgtccgc gtgaggaccc cgccgctgtc 61 gccgctcccg ttccggccct ggcccctctg cccggcagcg cggcgcacca tgggctccat 121 tctcagccgc cgcatcgcgg gggtggagga catcgacatc caggcgaact cggcctatcg 181 ctaccctccg aagtccggaa actactttgc ttcgcacttt ttcatgggag gagagaaatt 241 cgacaccccc caccctgaag gttacctctt tggagagaac atggatctga acttcctggg 301 cagccgcccg gtccagtttc cctacgtcac tcctgccccc cacgagcccg tgaagacgct 361 gcggagcctg gtgaacatcc gcaaagactc cctgcggctg gtgaggtaca aagacgatgc 421 cgacagcccc accgaggacg gcgacaagcc ccgggtgctc tacagcctgg agttcacctt 481 cgacgccgat gcccgcgtgg ccatcaccat ctactgccag gcatcggagg agttcctgaa 541 cggcagggca gtatacagcc ccaagagccc ctcgctacag tccgagaccg tccactacaa 601 gagaggggtg agccagcagt tctccctgcc ctccttcaag attgacttct cggaatggaa 661 ggatgacgag ctgaactttg acctggaccg gggcgtgttt ccagtagtca tccaggctgt 721 ggtggacgaa ggagatgtgg tggaagtgac tggccacgcc cacgtgctct tggctgcctt 781 tgaaaagcac atggacggca gcttctctgt gaagccttta aagcagaagc aaattgtgga 841 ccgggtcagc tacctcctgc aggagatcta tggcattgag aacaagaaca accaggagac 901 caagccctcg gacgacgaga acagcgacaa cagcaacgag tgtgtggtgt gcctgtccga 961 cctgcgggac acgctgatcc tgccctgccg ccacctgtgc ctctgtacct cctgcgccga 1021 cacgctgcgc taccaggcca acaactgccc catctgccgg ctgcctttcc gggccctcct 1081 gcagatccgg gcggtgcgga agaagccagg agccctgtcc cccgtgtcct tcagccccgt 1141 cctggcccag agcctggagc atgatgagca ctcttgtccc tttaaaaaat caaagccgca 1201 ccccgcctcc ctggccagca agaaacctaa aagggaaaca aactctgaca gcgtcccacc 1261 tggctacgag cccatctcgc tgctcgaggc gctcaacggc ctccgggctg tctccccggc 1321 catcccctcg gcccctcttt atgaagaaat cacctattca ggcatctcgg acggcctgtc 1381 ccaggccagc tgtcccctcg cggctatcga ccacatcctg gacagcagcc gccagaaggg 1441 caggccgcag agcaaggccc ccgacagcac cctacggtcc ccgtcttccc ccatccacga 1501 agaggatgag gagaagctct ccgaggacgt ggacgcccct cccccactgg gtggcgcaga 1561 gctggccctg cgggaaagca gctcccctga gagtttcata acagaagagg ttgatgagtc 1621 gtcgtcacca cagcaaggga cccgagcagc ttccattgag aatgtcctgc aggacagcag 1681 ccccgagcac tgtggccgag gcccacctgc tgacatctac ctgccaggac ggcccacctc 1741 catggagacg gcccacggcc tcgccaccac cagccccacc tggcctccac ttggtggccc 1801 cagccccgat cccagcgccg ccgagctgac cccactctga gagcctggcc gagctggcag 1861 catggagccc tcggctcccc agactttgcc gaggggctgc tccggacccc gttgtgagcc 1921 ggcctcctgt ctgcatgccc cctgtggcca ccaggctccg aggggccgtg gtgactcttg 1981 atcaaagagc acagtgaact gtcccttctg agtctccctt ttctacagtt gatatatttg 2041 taactggtac aagatgaagg acagcagctt tccatcccta gttcagagcc cccgttcccc 2101 agggtcctgt gggctgagcg gctggggctg gggctgccca cgtgtggcct ccgctggctc 2161 tgcctgctcc tgcaacagtg cggtccctgc ccggagaact caggaggcct gcagaagaga 2221 actgattggt ggtcgaagca ccatcttcac agatgttcag gggcagtggg gggctccagg 2281 cacggtcaat gaaggaaaca gtgcctgtcc acccaccctg cgtgtcactg tggcggcctg 2341 gctgtcgctg ctttttgtcc tctgacgtgt ttgcgcggcc tcagtgccct ccctggtgcg 2401 tctgcgctgg ggccctcagt gctcggggcc ttggggtgca tgggcgccgc cctgggcagc 2461 tagagtgtct cagcccggtg ctgggcctgg ccgaggggcg gaggcacagc tgcttccagc 2521 agccagcatt cagtggcctt gtcaccaagc tccacacctc ctcctggtgc tggctttggt 2581 gacatcacaa ggcccctcca ggtgcagggg cttctgtttg gcaggcccct gccagggagg 2641 acctggtggc ctcctcattc tcttttgcca ttggaatgtc cccttgcagt tctcttctct 2701 tttttttttt ttgagatgga gtttcactct tgctgcccag gctggagtgc agtggctcaa 2761 tctcgggtca ctgcaacctc cgcctcccgg gttcaagtga tcgtcctgcc ttaggctcct 2821 gagtagctgg ggattacagg tgcctaccag catgctcggc taattttttt gtatttttag 2881 tagagaaggg atttcaccat gttggccggg ctggtctcaa actcctaagg tcatccacct 2941 gcctcggcct cccagagtgc tgagattaca ggcgtgagcc tccgcgcccg gcccccttgc 3001 agttctctct gatttggttt gttctgtctc aggcttctgt ggcaggactg gcccagggag 3061 gaggaagcca gcagcacacc tggggaatgg ggtcccggcc gggaggcttg gcctctgggc 3121 gacctcgtcc tgttttgttt gtttgtttgt ttgttttttt aaaggtaaac ctcctgggcc 3181 gcagatggca aagggagtgc ctgggcctgg tgacccaggg ctggatccac ccctgcggag 3241 ccctgggcca ggcaggtgtc tgctgctcac ctggctctgg agggctgccc tgcagctggg 3301 cctggggaca ggtcggctgt ggggcagctc agtaccctcc ctgaggctca cggtggctcc 3361 gagcatgagc tctgcctcct gggcgagacc cagcagtgga cagcacggtc ctcacaccca 3421 gctccctgca cacccaggcc agccacccct cccgctcgtg cacaggcacg cagatgcgct 3481 cacacgtaca cacacacaaa tgcacgccca cttgcacatg ctcacgcaca cgttcacaca 3541 tgcacactca cgctcacaca tgctgtcacg catacacaca cgcacatact cctgcacatg 3601 ttcccatgca tgtgtgtgca ctcggaccga gcatctccca cgcacctcta ccccacccca 3661 agcacctctc tccccccatg cacctctccc caacaacaca cacagccccc tgcaccgccc 3721 gccccccgcc cccaccaagg ccccagcctc tggccatcag tcctggtgcc agagctttgc 3781 gtgaagttcg ggccgcagag tggcccgctg ggactcccat gtgctgccgt ctgatgtgct 3841 cagatgggct catcgttggt tcgtttttac tgtatattta tagtaataaa atcatgcagc 3901 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //