LOCUS BC050381 3613 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAD21 homolog (S. pombe), mRNA (cDNA clone MGC:51902
IMAGE:6044010), complete cds.
ACCESSION BC050381
VERSION BC050381.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3613)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3613)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: i Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453993.
FEATURES Location/Qualifiers
source 1..3613
/db_xref="H-InvDB:HIT000053431"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51902 IMAGE:6044010"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3613
/gene="RAD21"
/gene_synonym="hHR21"
/gene_synonym="HR21"
/gene_synonym="HRAD21"
/gene_synonym="KIAA0078"
/gene_synonym="MCD1"
/gene_synonym="NXP1"
/gene_synonym="SCC1"
/db_xref="GeneID:5885"
/db_xref="HGNC:HGNC:9811"
/db_xref="MIM:606462"
CDS 129..2024
/gene="RAD21"
/gene_synonym="hHR21"
/gene_synonym="HR21"
/gene_synonym="HRAD21"
/gene_synonym="KIAA0078"
/gene_synonym="MCD1"
/gene_synonym="NXP1"
/gene_synonym="SCC1"
/codon_start=1
/product="RAD21 homolog (S. pombe)"
/protein_id="AAH50381.1"
/db_xref="GeneID:5885"
/db_xref="HGNC:HGNC:9811"
/db_xref="MIM:606462"
/translation="MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESI
ISPKVKMALRTSGHLLLGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENRE
AAYNAITLPEEFHDFDQPLPDLDDIDVAQQFSLNQSRVEEITMREEVGNISILQENDF
GDFGMDDREIMREGSAFEDDDMLVSTTTSNLLLESEQSTSNLNEKINHLEYEDQYKDD
NFGEGNDGGILDDKLISNNDGGIFDDPPALSEAGVMLPEQPAHDDMDEDDNVSMGGPD
SPDSVDPVEPMPTMTDQTTLVPNEEEAFALEPIDITVKETKAKRKRKLIVDSVKELDS
KTIRAQLSDYSDIVTTLDLAPPTKKLMMWKETGGVEKLFSLPAQPLWNNRLLKLFTRC
LTPLVPEDLRKRRKGGEADNLDEFLKEFENPEVPREDQQQQHQQRDVIDEPIIEEPSR
LQESVMEASRTNIDESAMPPPPPQGVKRKAGQIDPEPVMPPQQVEQMEIPPVELPPEE
PPNICQLIPELELLPEKEKEKEKEKEDDEEEEDEDASGGDQDQEERRWNKRTQQMLHG
LQRALAKTGAESISLLELCRNTNRKQAAAKFYSFLVLKKQQAIELTQEEPYSDIIATP
GPRFHII"
BASE COUNT 1167 a 658 c 774 g 1014 t
ORIGIN
1 cacctcgcaa gggctccccc ctttccccac cccctccccc gacccttttc ccctccccgg
61 gccacccagc ccgcccaact cccagcggag agcaaggttt tcttctgttt tcatagccag
121 ccagaacaat gttctacgca cattttgttc tcagtaaaag agggcctctg gccaaaattt
181 ggctagcggc ccattgggat aagaagctaa ccaaagccca tgtgttcgag tgtaatttag
241 agagcagcgt ggagagtatc atctcaccaa aggtgaaaat ggcattacgg acatcaggac
301 atctcttact gggagtagtt cgaatctatc acaggaaagc caaatacctt cttgcagact
361 gtaatgaagc attcattaag ataaagatgg cttttcggcc aggtgtggtt gacctgcctg
421 aggaaaatcg ggaagcagct tataatgcca ttactttacc tgaagaattt catgactttg
481 atcagccact gcctgactta gatgacatcg atgtggccca gcagttcagc ttgaatcaga
541 gtagagtgga agagataacc atgagagaag aagttgggaa catcagtatt ttacaagaaa
601 atgattttgg tgattttgga atggatgatc gtgagataat gagagaaggc agtgcttttg
661 aggatgacga catgttagta agcactacta cttctaacct cctattagag tctgaacaga
721 gcaccagcaa tctgaatgag aaaattaacc atttagaata tgaagatcaa tataaggatg
781 ataattttgg agaaggaaat gatggtggaa tattagatga caaacttatt agtaataatg
841 atggcggtat ctttgatgat ccccctgccc tctctgaggc aggggtgatg ttgccagagc
901 agcctgcaca tgacgatatg gatgaggatg ataatgtatc aatgggtggg cctgatagtc
961 ctgattcagt ggatcccgtt gaaccaatgc caaccatgac tgatcaaaca acacttgttc
1021 caaatgagga agaagcattt gcattggagc ctattgatat aactgttaaa gaaacaaaag
1081 ccaagaggaa gaggaagcta attgttgaca gtgtcaaaga gttggatagc aagacaatta
1141 gagcccaact tagtgattat tcagatattg ttactacttt ggatctggca ccgcccacca
1201 agaaattgat gatgtggaaa gagacaggag gagtagaaaa actgttttct ttacctgctc
1261 agcctttgtg gaataacaga ctactgaagc tctttacacg ctgtcttaca ccgcttgtac
1321 cagaagacct tagaaaaagg aggaaaggag gagaggcaga taatttggat gaattcctca
1381 aagaatttga aaatccagag gttcctagag aggaccagca acagcagcat cagcagcgtg
1441 atgttatcga tgagcccatt attgaagagc caagccgcct ccaggagtca gtgatggagg
1501 ccagcagaac aaacatagat gagtcagcta tgcctccacc accacctcag ggagttaagc
1561 gaaaagctgg acaaattgac ccagagcctg tgatgcctcc tcagcaggta gagcagatgg
1621 aaataccacc tgtagagctt cccccagaag aacctccaaa tatctgtcag ctaataccag
1681 agttagaact tctgccagaa aaagagaagg agaaagagaa ggaaaaagaa gatgatgaag
1741 aggaagagga tgaagatgca tcagggggcg atcaagatca ggaagaaaga agatggaaca
1801 aaaggactca gcagatgctt catggtcttc agcgtgctct tgctaaaact ggagctgaat
1861 ctatcagttt gcttgagtta tgtcgaaata cgaacagaaa acaagctgcc gcaaagttct
1921 acagcttctt ggttcttaaa aagcagcaag ctattgagct gacacaggaa gaaccgtaca
1981 gtgacatcat cgcaacacct ggaccaaggt tccatattat ataaggagct agaagcatta
2041 tagctagtgt ttgattcact agtgcttaca aattgccccc atgtgtaggg gacacagaac
2101 cctttgagaa aacttagatt tttgtctgta caaagtcttt gcctttttcc ttcttcattt
2161 ttttccagta cattaaattt gtcaatttca tctttgaggg aaactgatta gatgggttgt
2221 gtttgtgttc tgatggagaa aacagcaccc caaggactca gaagatgatt ttaacagttc
2281 agaacagatg tgtgcaatat tggtgcatgt aataatgttg agtggcagtc aaaagtcatg
2341 atttttatct tagttcttca ttactgcatt gaaaaggaaa acctgtctga gaaaatgcct
2401 gacagtttaa tttaaaacta tggtgtaagt ctttgacaag aaaaaaaaac aaacaaacac
2461 ttctttccat cagtaacact ggcaatcttc ctgttaacca ctctccttag ggatggtatc
2521 tgaaacaaca atggtcaccc tcttgagatt cgttttaagt gtaattccat aatgagcaga
2581 ggtgtacgcg aaattgtgtt atgactgata gccttcagct acaaaaagat aggactgacc
2641 tggtttaaag tgttctattt tgtaaatcat tccatttgag tctttctgat gaacttggct
2701 atactgaaat ctgttatttt agtgaggctc caaaatgagc aaagctaggc ctgattagag
2761 tagagtgact attaaaaaac ataactttct aggagctata aatcaaagtt ttaaaaagat
2821 gtttggatat atttgagtat tccgatcatg aaaacagaaa ttgccctgcc tactacaagg
2881 acagactgat gggaaattat gcacctggtc aacttagctt ttaagcagac gatgctgtaa
2941 aaactaacgg cttctctgat atttattgta agttttagta ctgatctcct tttccagtgc
3001 tgcacactcc tggtttggaa ctttaatagc gttgcaacga aatcctatat ccagtttcct
3061 gtaatttaat tgaagaaaaa tacatccaaa taaagacttt attattaaca gaccagatag
3121 catcagaaat catgtgactg ttatgattat cagaatgtct taacttttta gggcaaagtt
3181 aacactgaaa gttctagctt aagtgttgaa acttttgtgg gaaaaaaaaa tcacttttga
3241 aactcagact tcagtgtata cccaataatt taaaattatg tgaaatgttt taaatttgtg
3301 aactcgtaat tactgtttta atgattcagt ttcttcagag tggtaattgt ataaaattgc
3361 tattgcagct ttacattcaa tatgatgtgc ctgtaaacca aggagttttc cccgtttgta
3421 aaaagacatt gtagataatt gaatgtttga ttttagaaag gtcattagtt tcttgttaca
3481 cattttgtta gtctggtttt tgttgcttat cgggtttaat attgttcttg aaaatagttg
3541 atgctatgtt atgtataact tttctaataa aagttgtgtt ataagctgta aaaaaaaaaa
3601 aaaaaaaaaa aaa
//