LOCUS BC050352 4460 bp mRNA linear HUM 30-JUL-2005
DEFINITION Homo sapiens WD repeat domain 7, mRNA (cDNA clone IMAGE:5265024),
partial cds.
ACCESSION BC050352
VERSION BC050352.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4460)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4460)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: p Column: 18.
FEATURES Location/Qualifiers
source 1..4460
/db_xref="H-InvDB:HIT000259108"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5265024"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..4460
/gene="WDR7"
/gene_synonym="KIAA0541"
/gene_synonym="TRAG"
/db_xref="GeneID:23335"
CDS <1..1845
/gene="WDR7"
/gene_synonym="KIAA0541"
/gene_synonym="TRAG"
/codon_start=1
/product="WDR7 protein"
/protein_id="AAH50352.1"
/db_xref="GeneID:23335"
/translation="KGTYGVSRAVTTQHLLSIISLANTLMSMTNATFIGDHMKKGPTR
PPRPSTPDLSKARGSPPTSSNIVQGQIKQVAAPVVSARSDADHSGSDPPSAPALHTCF
LVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEVREAAQALLLAELR
RIEQAGRKEAIDAWAPYLPQYIDHVISPGVTSEAAQTITTAPDASGPEAKVQEEEHDL
VDDDITTGCLSSVPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEIEPPKLLTRPRS
SSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRTAIDLIGRGFT
VWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIATARPP
AFITTIAKEVHRHTALAANTQSQQNMHTTTLARAKGEILRVIEILIEKMPTDVVDLLV
EVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERNHRIAVGARHGSVALYDIRT
GKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQLR
CIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHDGKEHRFMV"
BASE COUNT 1252 a 996 c 947 g 1265 t
ORIGIN
1 aagggaactt acggagtgtc ccgtgccgtc accacacagc atctcctgtc tatcatttct
61 ttggcaaata ctttaatgag tatgaccaat gcaactttta ttggtgatca tatgaagaag
121 ggtcctacga ggccacctag accaagcacc ccagaccttt ctaaggcaag gggttcccct
181 ccaacttcca gtaatattgt gcaaggacag attaaacaag ttgctgcacc tgtcgtttcc
241 gctcggtctg atgctgatca ctctggctct gaccctcctt ctgctcctgc tttacatacc
301 tgtttcttag taaatgaagg ttggagtcag ttagctgcta tgcactgtgt tatgctgcca
361 gacctactgg gattggataa atttaggcct ccccttctgg agatgctggc ccgaagatgg
421 caagatcgat gcttggaggt gagagaagcc gcgcaggccc tgcttctggc ggaactgaga
481 agaattgagc aggcaggcag gaaggaagcc attgatgcct gggctcctta cttacctcag
541 tacatagacc acgtcatatc acctggagtc acatcagaag ccgcgcagac tatcaccacg
601 gctcctgatg cctcagggcc tgaagcaaaa gtccaggagg aagagcatga ccttgttgac
661 gatgacatca ccactggttg cttatcaagt gtcccacaaa tgaaaaaaat ttctacatct
721 tacgaggaaa gacggaagca agctaccgct attgttttac ttggagtaat aggagctgaa
781 tttggtgctg aaattgaacc tcctaaacta ttgaccagac ctcgaagctc tagccaaatt
841 cctgagggat tcgggttgac tagtggtgga tccaactact cgctggccag acatacttgc
901 aaggcactga cgtttcttct gctacagcct ccaagcccca aacttcctcc acacagcact
961 atccgaagaa cagccattga tctgattgga cgtgggttca ctgtttggga gccttacatg
1021 gatgtgtccg ctgttctgat ggggcttctc gaactttgtg ccgatgccga gaaacaactt
1081 gccaacatca caatggggtt gcctctgagc ccagcagctg actcggcccg ctctgcgagg
1141 catgccctct cgctcattgc caccgccaga ccacccgcct tcatcaccac catagccaaa
1201 gaggtacaca gacatacggc tcttgcagca aatacccaat cacagcagaa tatgcacaca
1261 acaactcttg cacgagctaa aggggaaatt ttgagagtca ttgaaattct tattgaaaag
1321 atgcccacag atgttgtgga tcttctcgtg gaggttatgg acatcattat gtactgcctt
1381 gaaggatctt tagttaaaaa gaaaggtctt caagaatgtt tcccagccat ctgcaggttc
1441 tacatggtca gctattatga gcggaatcac agaatagcag ttggagctcg ccatggttca
1501 gtggccctgt acgacatccg gactggaaaa tgtcagacaa tccatggaca caagggacca
1561 atcactgcag tggcttttgc tcctgatgga agatatcttg ccacctactc aaacactgac
1621 agccacattt ctttttggca gatgaacacg tcactgctgg gaagcatcgg catgctgaac
1681 tcggcacctc agctgcgctg cattaaaacc taccaggtgc cccctgtgca gcccgcgtcc
1741 cccggctccc acaatgccct caagctggcc cggctcatct ggacttccaa ccgcaacgtc
1801 atcctcatgg cccatgacgg gaaggagcac cgcttcatgg tctaatgctg ctgcctgccg
1861 ccgtgactgc gttttagttc tctaaattat ccaagccgat gttgctctgt ccttcctcac
1921 accagattgt tcccaggggc ctgcccaccc cagtgccatc cagtggcacg gccggccggg
1981 tcttgtcact tgtgcatgct tctcaggggc agaacccgct cgtgccatct gtcgattcag
2041 aggcacgcac acatgctctg caggatgtgg ccatcctgtc accaggtagt ttttccctgc
2101 cagagatggc aggggaaagc cagcggttcc tgggaacgct cttgttgctt ggtgcaacag
2161 aagcacaaaa atcaataaac actgtgattg cactcccagc ccagatcagc atttttagcc
2221 atctcaaccg cacctctgaa gtgctgcttg aatctggccg ttctgacact gggtgttagg
2281 tcatgtggca gtcctcacga ttgaaattat tgccctttga attacctaaa atattgttta
2341 ccaaaaagat tctgtgttta catgttcttt tcttctggtg attgctagga aattactcaa
2401 tccaatttcc tagggtttag ctaccacctt ctttatcaac agctaaccaa tttgagattc
2461 atgattaatt atgtacacaa aaatattttc cttgtagaaa atagttttcc agacacttag
2521 ccttctgaag tgctcatctc ttgcttaaat gatagtctat ttagtagttt aaaataaaaa
2581 taatcactcc ctatgatcta gttaatgtaa ttatccagtc actgtaacta atctcttgaa
2641 gggacttttg tgataaagag ccaagttcag aagcatagcg tgtaccgaaa atgaagactc
2701 tcctatctac tgctacagat cctgttgaag aaagagctta cccctttccc ccggaaaact
2761 tgcaatcctg tagttcccat atgtgtggca tatgtcagtt atgaaattat tataattcag
2821 ccttcaaact actactgatc aactaaagga aagctaataa ggtatttctt ttaaacaagt
2881 attctggaaa agtaatgact atggcacaaa tgttcaggag tgtatataaa aatatgtggg
2941 ctctcgattt atttgagcaa acattgcaat gagggtgttc attatgcttc taagtaagct
3001 ttaactagac cactttcttc ttatgtcaga ttgtgctggt tctagctcat aataatgaaa
3061 aaaatagaat tatattttgt atgaattgtt tctaacaaac cttgatctgt atatacttgt
3121 gaggggttgt ttggttgcct aattgttgat tggttggtta gttgggcaaa atcatttatt
3181 acatgcaaaa atagaaaatt atttgttaaa ttcagagaaa atatgtgaag tttacaaagg
3241 aaccaaaatg ataatgggag aatttagtct taaaagttta ggttgtcaga gtttatctga
3301 tatacaaaaa agtaggatca aagtctagga acaaacattg gttatttcac tgaaacagat
3361 ttttaaagag catattaaga aattaagacc attagatcat ctctttcata atgatatgat
3421 gttatttcca ttgacggcaa atctatactg ttccttggtt ttagagttgg gtattctttc
3481 aaaagtgaat ttaggcacat gcatgtacat tgtatttata aagattatat atgtagtttc
3541 caaggaagaa acaaagacct atacagttta gactttattt gtttggtgaa cgtgctgttg
3601 tgtttggcat agctagagaa atgtaaggta aaaggctcac tttgttttcc agtgggtcca
3661 gagtcttctc tatacccaac atatgtttac tttatgaact taaatggaaa ttaatttatt
3721 gtagactaca tctctatttg gaatgatgag gtaaatgtat accttagcat tttctttaac
3781 aaaaatgttc tgtgtgtcag gaaagaggtg tgagagcggt aggcagcctg ccgcaaacac
3841 acggatggct ccccccgcca cgaaggttga gaacaaagcc agggggccca gaggagcaat
3901 agccctgggc cacaagcgtg ggtaggcctt tcacgtattc cgtctgcaca ggcaaccaag
3961 gccagtagaa agctatggct gcaaaaccct ggggtggacg atgtttgatg attagacggt
4021 catctctaac tactaaacta atatctgcat tcttgttaac ataaatctct ccttggctat
4081 tttaatagcc acagtcccaa acttcatccc agcttagatt tctcagcact gaggtaaact
4141 ctgcattgtc atcccagcgt acacctttaa tgttttattg atttcactgg cactgtattt
4201 ggacctgtcc ttgtatatgt agagacatat gtggcttcat tggtaattta caagcaaaag
4261 atgacatgac gtgacacctg tatgaaaatg tgatgattga actccctgtg tacagcgagt
4321 gaattaaaat gtctgcctct ccagacattt cttaatgatt ccacttaata gactctatgt
4381 gtgctgaatg ttcctgtgta catatgtgtg ttaaataaaa caattgtatt gaaaaaaaaa
4441 aaagaaaaaa aaaaaaaaaa
//