LOCUS BC050346 3083 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens SET domain containing (lysine methyltransferase) 8,
mRNA (cDNA clone MGC:51149 IMAGE:4838030), complete cds.
ACCESSION BC050346
VERSION BC050346.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3083)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3083)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: k Column: 17.
FEATURES Location/Qualifiers
source 1..3083
/db_xref="H-InvDB:HIT000053418"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51149 IMAGE:4838030"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3083
/gene="SETD8"
/gene_synonym="PR-Set7"
/gene_synonym="SET07"
/gene_synonym="SET8"
/db_xref="GeneID:387893"
/db_xref="HGNC:HGNC:29489"
/db_xref="MIM:607240"
CDS 427..1485
/gene="SETD8"
/gene_synonym="PR-Set7"
/gene_synonym="SET07"
/gene_synonym="SET8"
/codon_start=1
/product="SETD8 protein"
/protein_id="AAH50346.1"
/db_xref="GeneID:387893"
/db_xref="HGNC:HGNC:29489"
/db_xref="MIM:607240"
/translation="MARGRKMSKPRAVEAAAAAAAVAATAPGPEMVERRGPGRPRTDG
ENVFTGQSKIYSYMSPNKCSGMRFPLQEENSVTHHEVKCQGKPLAGIYRKREEKRNAG
NAVRSAMKSEEQKIKDARKGPLVPFPNQKSEAAEPPKTPPSSCDSTNAAIAKQALKKP
IKGKQAPRKKAQGKTQQNRKLTDFYPVRRSSRKSKAELQSEERKRIDELIESGKEEGM
KIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQ
YLSKTYCVDATRETNRLGRLINHSKCGNCQTKLHDIDGVRHLILIASRDIAAGEELLY
DYGDRSKASIEAHPWLKH"
BASE COUNT 823 a 773 c 803 g 684 t
ORIGIN
1 agatccggtc ggctcggagc ccagggctcc agccgggcta ctcacgctcc ggaggcggag
61 cttcagcagc gggaggggga ggaatctggg gcctcccaat ggcagctcgg gtgtcttcca
121 tcgcagccat tcaacgtctg gcgacggtca aatttaaaca cccctcccac ctcctccgcc
181 gggacctgtc gggaaagcgt ttgcagttat tgcggcggct ggacacgccc cgccgccgaa
241 gaggcgggag aagggcgggg cctttctccg agttggccta tcactacggg cagcctgcgg
301 agaggcggga ggcggcgcca atcggggcga gcagctggag cccggcggag cagttggctg
361 agttgttgca acttttttcg aaagctgggt ttcccgggag atcccaggcg gtgacagagt
421 ggagccatgg ctagaggcag gaagatgtcc aagccccgcg cggtggaggc ggcggcggcg
481 gcggcggcgg tggcagcgac ggccccgggc ccggagatgg tggagcggag gggcccgggg
541 aggccccgca ccgacgggga gaacgtattt accgggcagt caaagatcta ttcctacatg
601 agcccgaaca aatgctctgg aatgcgtttc ccccttcagg aagagaactc agttacacat
661 cacgaagtca aatgccaggg gaaaccatta gccggaatct acaggaaacg agaagagaaa
721 agaaatgctg ggaacgcagt acggagcgcc atgaagtccg aggaacagaa gatcaaagac
781 gccaggaaag gtcccctggt accttttcca aaccaaaaat ctgaagcagc agaacctcca
841 aaaactccac cctcatcttg tgattccacc aatgcagcca tcgccaagca agccctgaaa
901 aagcccatca agggcaaaca ggccccccga aaaaaagctc aaggaaaaac gcaacagaat
961 cgcaaactta cggatttcta ccctgtccga aggagctcca ggaagagcaa agccgagctg
1021 cagtctgaag aaaggaaaag aatagatgaa ttgattgaaa gtgggaagga agaaggaatg
1081 aagattgacc tcatcgatgg caaaggcagg ggtgtgattg ccaccaagca gttctcccgg
1141 ggtgactttg tggtggaata ccacggggac ctcatcgaga tcaccgacgc caagaaacgg
1201 gaggctctgt acgcacagga cccttccacg ggctgctaca tgtactattt tcagtatctg
1261 agcaaaacct actgcgtgga tgcaactaga gagacaaatc gcctaggaag actgatcaat
1321 cacagcaaat gtgggaactg ccaaaccaaa ctgcacgaca tcgacggcgt acgtcacctc
1381 atcctcatcg cctcccgaga catcgcggct ggggaggagc tcctgtatga ctatggggac
1441 cgcagcaagg cttccattga agcccacccg tggctgaagc attaaccggt gggccccgtg
1501 ccctccccgc cccactttcc cttcttcaaa ggacaaagtg ccctcaaagg gaattgaatt
1561 ttttttttac acacttaatc ttagcggatt acttcagatg tttttaaaaa gtatattaag
1621 atgccttcac tgtagtattt aaatatctgt tacaggtttc caaggtggac ttgaacagat
1681 ggccttatat taccaaaact tttatattct agttgttttt gtactttttt tgcatacaag
1741 ccgaacgttt gtgcttcccg tgcatgcagt caaagactca gcacaggttt tagaggaaat
1801 agtcaaacat aaactaggaa gccaggtgag tctcctttct ccagtggaag agccgggacc
1861 ttccccctgc acccccgaca tccagggacg gggtgtgagg aagacgctgc ctcccaatgg
1921 cctggacggg atgtttccaa gctcttgttc ccctaacgtc tcaacaggcg ctcactgaag
1981 tgtatgaata ttttttaaaa aggtttttgc agtaagctag tcttcccctc tgctttctcg
2041 aaagcttact gagccctggg ccccaagcac gggccgggca tagatttcct cttccacaag
2101 ctgccgcttt tctgggcacc ttgaagcatc agggcgtgaa atcaaactag atgtgggcag
2161 ggagagggtt gcttacctgc cctgctgggg cagggtttcc tgaaactggg ttaattcttt
2221 atagaaatgt gaacactgaa tttattttaa aaaataataa taaaaattta aaaaaattaa
2281 aaataaaaaa aaccacagaa aacaacttta catgtatata ggtcttgaag tgagtgaagt
2341 ggctgctttt tttttttttt ttttttgctt ttttttgctt tttgtagaag agattgagaa
2401 tggtactcta atcaaaaata aagttttgta gtgggaccag aaattactta cctgacatcc
2461 acccccattc cccctcatcc tgctggggtt gaaagttcca gacctgctgt cgaggccttg
2521 tgtttgtcag acacccagtg tcctcctgca aggacgcaac tgtgagctga ggtgtgagcc
2581 taggagcaca cagggcccgg cagcccccag gaatcaagga tagggctaag gttttcacct
2641 taactgtgaa ggcaggagga ataggtgact gcttcctccc gcccttcaca gaactgattc
2701 tcacacactg tcccttcagt ccagggggcc ggggctcagg agccatgacc tggtgtctcc
2761 tgcccaccct ggtcccaggt aaatgtgaat ggagacaggt atgagaggct gtcctcgtct
2821 ttgattcccc cccaacccca cctcgggcct cacgacggtg ctacctaaga aagtcttccc
2881 tcccaccccc cgctagcctg gtcagtggtc agcaaattgg aagaggatcc gatgggagtg
2941 taaatgtgag acacaatgtc ttgattatac ctgtttgtgg tttagctttg tatttaaaca
3001 aggaaataaa cttgaaaatt atttgtcatc ataaaaatga aacaaattaa aatatttatt
3061 gccaggcaaa aaaaaaaaaa aaa
//