LOCUS BC050332 4018 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens cDNA clone IMAGE:4838272.
ACCESSION BC050332
VERSION BC050332.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4018)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4018)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 90 Row: k Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..4018
/db_xref="H-InvDB:HIT000099158"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4838272"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1195 a 989 c 836 g 998 t
ORIGIN
1 aggctccttg aagacgcccg tggtgagatc agccccaggt cgccgcttcc acagacaggc
61 cttttcctaa agtggatgaa gggagtcaaa taggccagct tcgtgtcttg atctgccttt
121 gctgtcattc acgcatctgt cctcatgaag gcttaaccta ccatgtttat cggaaatctc
181 agcctaaatt cgatttttac ctagagatga ggaatgtgtt aaatcactct actccacaag
241 gaaccaaacc aaacagcatc agcaccaggc tgagtcgcgg aaaggatctg tcagaccgct
301 ccactggcat cgactcagct cgggagctac gttcaaagaa ggaggacatt taaggtgaaa
361 gggttgcagg cagaggggcc tggagcagca ggaggccacc tcccaaaggc tccactccca
421 ggggccaaca gagagaccac atccagaatt gaaccaggga tacgcagaca ccaacggaga
481 agacatgagc gtcaacctcc tccacggagc agcacggctt ctctactgac atccatgaac
541 tagactacaa ctctctaagt taatcaaatt tactaagtta gttatcaccg acatcactgt
601 tccatgtcaa atccatggat tcatgagtca aagaaacagc agtgaacagc cttcaggcta
661 cggtttgggc cattcctctg ccagcgtatt ccagccaaag tctgttttcc tatcagacta
721 ctcactgcaa ggcacagaag tgagcgcggg atctaaggcc acaccgcagg gtctgaactc
781 acttaactgg cccaacactg cacaagatac ttaatcctcc tgaacctcag tttcttcatc
841 tgcgtacggg ggatatgaac ccccacatgc tggactgctc tgagaattga gttaatgcgt
901 gtaaaacatg agagctgctc tggcacccgc caggcgctca ccgggcgcca gcaccaccag
961 tgcatacctc gaccgtgtgt gggcgcacag gcctccgttc ctttttactc cgaccgatgc
1021 ttctaaggaa gtcttcgacc gctttttctg tctgaggcat ctgctgagga gtcgcattca
1081 ctgaacacct gtttgaaaaa ttacgtatac ataaaaccac tgttagaaaa aacagtttta
1141 gtaattcatc acattttgta taactcaata atgttgtttt tatagaaaat actgttcaga
1201 gtgttaaaca gcagccaaat gtggaaatgc cacggccacc tccctgctct gcagtgcttc
1261 aggttatcaa gagatttccg cacagttcaa tgtggcagct aatgaagccg tccatacgcg
1321 gagcctgtga ctctaaactc tagttcttct gaagagcaaa gaaaatacag agactattaa
1381 gatctgctaa ccgtgccttc ggaattacac tatcaaaaca ctgacaactt ttaaaattac
1441 tgtccagaag tcatcaattt gaaaatgtga actggttgtt aaagcagaac attataaagt
1501 gcaaaaaaat accatgctct caaagttaca tgaaaataga actcttccaa attccacaga
1561 attgcaaata ctactatcat ataaaagcta cttgaactct acagtatatt gacagagtgt
1621 atattttttc ctttcagctg taaatcctga acttattcta gttaaagtaa cagcaggtac
1681 cattatatta atactaacta tatcccaggc atgtatgctg ccttgcagat attctttctt
1741 ttattcctta cgataaacct gcaaaggaag gttttatgga ggaggaagca gaagacgcaa
1801 gtgggtcagc tgcccaggac cgcctgggag cgagtgtgag tgctgacccg gcggcaccag
1861 aagccaggcc tgcctgagcc caatgccaag agaccctgat cgccaggctt cacctctggc
1921 cacccacaga ccgccctgta gaatctgcca gggattctca ggacatgact ggggaaaggc
1981 atcaggactc tctgtgaaga aggacaagtg acttcagcaa acattttctt gttaagtact
2041 gatgaataca tcaatgtcac tgacaataag atgctgaaaa taaacaatca tttttaaact
2101 ttattcatgc tcacacatct gagggcataa ggccaactga aggtatagga ctgagctgcc
2161 agatgtttcc tcaaagcatc acataatttt ataagaaact gcacttttac tctggtcttc
2221 agcaagctca cctttacaga tacctcagtt acggaccatg tgcttttgga agcaatataa
2281 ctacttgccc tcaatctatt tgcacttcta gcacaaaatt agcctgcttt cttccccatc
2341 tcctacaact tttaataggc ttaaaatatt ttcttagttt gttagaacac ttgacattta
2401 caataaattc tataaccttt accaagcact ctatcttgaa gtttctacaa gtaagaaata
2461 cctaaaaact atacttaata gaatgaatca taaaatattt agaaacaaat cacacatgca
2521 cctcatatta tcaccattta acaagtgttt cttgatacgt gggagcttcc tcaggatggg
2581 tttgatatct gtcatttctg caatcctctt catcagccgc acctaagcca gaggaaactc
2641 gctcagagag aggcagaggc tacaacagac ccgctgagtc tgaaccaagc acctgtgaca
2701 tcagaaccct gcttgggcag gggttatgtg tgcgagtgca cggcttgggc agggctggaa
2761 ctgggatgca gggtggtaca aagaggaaga tgagtcaaaa ccaaccaacc aattcttccc
2821 catatttagt cagttagaaa gttagcattt ctgggacata aattaatgta ttcccaaaga
2881 aattagtaac tctggaatat gtggctaaac cggagtaata gaggttcctt ccaagcttcc
2941 cacctgatcc atcccgctga aggtctcctg caggtcccct gcgggcgtga gggtccggcc
3001 tgccctgatg gatgcgtaca ggtgcccaga gtcaggaatt ccattggcga gctcctgggc
3061 ggtcatcttc accagcacct tgaagtgctc ctcttcttca aagcacgggc tatggaaaaa
3121 ggagaagaaa aaattcctgg agacccattc ctcacgtccc ttcagtatca tggaaagttg
3181 attaagtttt cagagtactt taacaaccaa agaaatttta taagtccata tgaactacaa
3241 gtaaaagtca gacttggaaa acaacaacac acacgagtaa aactgtctcc tttaaagtac
3301 ttcaaacaaa gatctctagt acaccccaag aatggacaac tcttgcaaat aaagttactt
3361 gttaaatatt tcactccata gctgcatcat gtctggcagg tttcgatcca ggcagagaga
3421 ggagaaaagc acaccctgaa ccaaggaaaa cacagaagaa aggaattagg gccgaattga
3481 acagtgacag acactggaga aaagcttccc accgcagcag tcgtctgacg gtaccaggct
3541 acctgctcgt aggtgtccat gtgtgagtcg tcggggagca cgtggggaga agcactcatc
3601 cctccggtct tcaattctat ctgctgagcc tgctcccggt agtcaagaag gccgcagccc
3661 agcctgacac agcagagaag catcgccccg attacaagtc agtctttact gaatcatttt
3721 taaaatcgtg catcttgagt tacaagttgc ttccattaat tcaataactg cggctttgcc
3781 aacctctcta cacttcgaag gtcataagca ggtgcactct ggccttcgcc ctcgagagtt
3841 catgtgcccc cttccccagg gagaccccag tttctcccgc ctaggaagtt agcgtccaga
3901 ggcacaagac acttgggcag ccagtgtctg cacttaaaac accattctaa aataggcatt
3961 tccagttgta agctcttcaa taaatgtttt atgactactc caaaaaaaaa aaaaaaaa
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