LOCUS BC050283 4823 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens WAS protein family, member 3, mRNA (cDNA clone
MGC:41773 IMAGE:5300292), complete cds.
ACCESSION BC050283
VERSION BC050283.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4823)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4823)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 77 Row: f Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21237780.
FEATURES Location/Qualifiers
source 1..4823
/db_xref="H-InvDB:HIT000053402"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41773 IMAGE:5300292"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4823
/gene="WASF3"
/gene_synonym="KIAA0900"
/gene_synonym="SCAR3"
/gene_synonym="WAVE3"
/db_xref="GeneID:10810"
/db_xref="MIM:605068"
CDS 226..1725
/gene="WASF3"
/gene_synonym="KIAA0900"
/gene_synonym="SCAR3"
/gene_synonym="WAVE3"
/codon_start=1
/product="WASF3 protein"
/protein_id="AAH50283.1"
/db_xref="GeneID:10810"
/db_xref="MIM:605068"
/translation="MPLVKRNIEPRHLCRGALPEGITSELECVTNSTLAAIIRQLSSL
SKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFK
SSTVQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDL
WKEKMLQDTEDKRKEKRRQKREKHKLNPNRNQQVNVRKVRTRKEEWERRKMGIEFMSD
AKKLEQAGSAKEDRVPSGSHASDVTDYSYPATPNHSLHPQPVTPSYAAGDVPPHGPAS
QAAEHEYRPPSASARHMALNRPQQPPPPPPPQAPEGSQASAPMAPADYGMLPAQIIEY
YNPSGPPPPPPPPVIPSAQTAFVSPLQMPMQPPFPASASSTHAAPPHPPSTGLLVTAP
PPPGPPPPPPGPPGPGSSLSSSPMHGPPVAEAKRQEPAQPPISDARSDLLAAIRMGIQ
LKKVQEQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSEFDENDWSD"
BASE COUNT 1280 a 1122 c 1088 g 1333 t
ORIGIN
1 gtcgctcgcg ccgctgcgtg cggtgtggtg cgaggcgggt gcgccgggcg gccgcggcgc
61 ggcgggacca tggagctcag agcgcagccc cggcgccggc ggcgggaccg cggaccgttt
121 tagttttgat tgctgttaac tactactgat aactgagcca aagtggtgat gctacttgag
181 gggaatttct gcaacccata gtcaacgatt acatgattgt gaaccatgcc tttagtgaag
241 aggaacattg agccccggca cttgtgccgg ggagctctgc ctgaagggat taccagcgaa
301 cttgaatgtg taaccaatag tactcttgcc gctatcatac gccagctgag cagtctgagc
361 aaacatgctg aagacatatt tggtgagttg tttaatgagg ctaacaactt ctacatcaga
421 gcaaattctc ttcaagacag aattgatcgc cttgctgtca aagtcaccca gctggattca
481 acagtggaag aggtctcact acaggatatc aacatgaaaa aagctttcaa aagttccaca
541 gtccaagacc agcaagtggt ttcaaagaac agcattccta atcctgttgc tgatatttac
601 aaccagagtg ataagccacc gcctctgaac atcctgacac catacagaga tgacaagaag
661 gatgggctga agttctatac tgatccttcc tatttctttg acctctggaa agaaaaaatg
721 ctacaggaca cagaagacaa aaggaaagag aaaaggcgtc aaaagagaga gaaacacaag
781 ctgaacccta acagaaacca gcaagtaaat gtgagaaaag tcagaacaag aaaagaagag
841 tgggagagaa ggaaaatggg cattgagttt atgagtgacg caaagaaact ggagcaggca
901 gggagcgcca aagaggacag agtgcccagc gggtcacatg catcggacgt tacggattac
961 tcttacccgg ctactcccaa ccattctctg cacccccagc ctgtgacccc ttcctatgca
1021 gctggtgacg tgccaccaca cgggcctgca agccaggctg cggagcatga gtaccggccc
1081 ccatctgcct cggcgaggca catggccctc aacagacctc agcagccgcc ccccccgcct
1141 ccccctcagg ccccagaggg gtcccaggcc tctgcaccga tggctccagc agactacggg
1201 atgctcccag cgcagataat tgagtattac aacccatccg gaccacctcc tccgccacct
1261 cctcctgtga ttccctcagc acaaactgcc ttcgtcagcc ctctccagat gcccatgcag
1321 cccccgttcc ctgcatcagc cagctccacg cacgcagctc ctcctcaccc accctccacc
1381 gggctcctgg tcacagcccc gccacccccg ggcccaccac ctcccccgcc aggccctcct
1441 ggtcccgggt cttctctttc gtcctcccca atgcatggcc ccccagtagc tgaggcgaag
1501 cggcaagagc ctgcacagcc accaatcagt gatgctcgaa gcgacctcct cgctgctatt
1561 cgaatgggaa ttcaactgaa aaaggtgcag gagcagcggg agcaggaggc caagcgggag
1621 ccagtgggga atgacgtggc cacgatcctg tcccggcgca ttgccgtgga gtacagcgac
1681 tctgacgacg actcagagtt cgacgagaac gactggtccg actgagcaaa ggccggcgga
1741 gaggccgcgt gtgggagcgt gttgaagatt ttaagtggtc tctacaccca aatagtggta
1801 ttctaatccc gtagcatagc accttttgta taaacaatgt gatattgctt ctgcacatcc
1861 aaaaattctg ggtcttttca gtatttactg tgtaatactt aagtgccact aaacatagca
1921 aattgtgctg cacatgagga aataggctgt cactatcaca ttgtcctgaa aacagcatct
1981 gctttcctct tggccatgag agtatttagt gcagtttggg tttactctta ctgatcaata
2041 taactctgca gacttgctgt gtgtttgtga agctgcctgg tgttaggtct ctgcaagact
2101 aatgactatg tcagagtgat gtcttccaac cagtaagtga tattgtttca ccgctttggt
2161 ttttcctttt gtttttttaa aggatgtgtt tctgaataag ttggttttag agggaaaggt
2221 tcaacaaaca gggagaatcc agtgtttctg ctttcagttt cttggcttgg tagcctctga
2281 gtgaatctga tgctctgctg aataatttca ttacctctgc acatgcctgt caaatatgaa
2341 attggaaggg cccttttcag gctgggttcc ctgtgggcat ttgcttagta aatgcctgtt
2401 gatggttttt gcaagagaat tcagcagctc aacagtaatg aaagtgaaga acagagtcca
2461 ttttccttcc tggggccatt ggggatgaca ctcaagatac ttgccagtct ctccagtgtg
2521 ggcaccagcc ggccagaaca gatgcgagca gtccatgact ctgggagcta caccgctgag
2581 ctgggcagag ctgcggcaca gggcctgggc tgcaaaggag ccctgctcct ttagtttcct
2641 gacacctgtg tcctgaatga gccgcaggag ttcttagctc ctcagcgagc aacagagagc
2701 actttagatg gcacctttca ccacttggtc agaattttaa aagcttaggt ttaggtgaaa
2761 gtagatattg acagctattc acctttcacg gtgctggggc cagattaggg atcactcccg
2821 tgaggagggc cttcaccctg ttctagaagc acatggttgt cctcctgttg ttggcacatt
2881 aaatgataaa aagcacctca tgagattccc ttgatcagcc ctgcagctgt agtacagtgc
2941 tgtgccctca cctccaccct tcctgttgtt cccacgtggg caataccagg gacccatggg
3001 gaaactcaag aatgacagct tctatatttt gtaattctgg atgaaagata actgtgttga
3061 acaaacaggt gctccaggct ttgattatag atacgacttc aaaaatatgc taagacgctt
3121 gacttattaa ggactttaac ctactcaaca gtatttcata tccattgtgg ttagttactc
3181 agttatgttg agaagaatct ggagctaaaa gcagagatgt ttgaggtgac ggtaggaatg
3241 tgagcaggat ggtgatgggg gtttttgtta aaatgcatct gagcaagtca gccagccccg
3301 aagtcccctc agtgtgtgtg tctcgagtgg ctacctgttg ggcttgtggg cagtgattgt
3361 acagagcctg tccattgggt gcagtcatgt agatctgaag ccctgaaaag cctcatgtct
3421 gcatcccctt tccaaggctg cttccctggt gtgtctgttc tctcctctgt cccaggtgct
3481 gggagcgtcc tcttcagcgt cttttcctag agctggtcac cactaggctg tcactataaa
3541 ttccttgaat ataagtaaca gttattaatg aacttctaaa tttctaattt ctctctctct
3601 ctctcttttt tttttttttg ttgttgttaa aaagggccta ctacattggc gctattctta
3661 ggacttctgc aacttttaaa gtcttacttg tctttcttgt tgcttttgta ttaggagttc
3721 cccgtgtggg tctagaactc ccctttggta atacttcttt gtttttttat ggcccttctg
3781 ttctcaggat ggagagaaca cagaagctac tatccatgtc aggatttatt ctatttatat
3841 cttattacaa taaaattagt ggcactttat tcataaatat tcatgagcct gttaattgtt
3901 agttgtcttc ctgtagctga atcaacaagt tattttcaac tcaattttat gacttgcgaa
3961 aaagcttttg ccctgttgtg taccataaca tttaaaagaa tggaaaatga ctgaaatcca
4021 atttagatta tttttagagt atttttccag caaattcaat ttattctgaa atttaaatcc
4081 agatcttttc taatatggta ttacaatgaa aagaataaag agaagatttg aattttcagt
4141 ttcattttca aaaactattt accaaaacaa atggagaaga aacatccaaa agcacatttc
4201 atttctccaa actttgtgtt ttaaattata gttataaatt gtaaggtaat tttaaattgt
4261 ccctcgtatt atttctccac gtctgtttta gtttaatgtc tcctaagctt ttctctcata
4321 gcgtagacct agggaaggga tgggaagatt gcccagtccc cgatggctgc gcacacagga
4381 ggcggcggag cacaaggcaa gtgagtttgc actgtcagcc ccagaccgta agcttggcta
4441 cactgatgtt tttctttact aaggatacta ttcaaaaatt aacattttca tctcagtaag
4501 tttttagaac atcaaaatgt tttctgagct ccaagtggct aggttgtaaa agttttataa
4561 taatttgcaa ttaaaataca tgatacatat taatccatta aagactagtg ggaatgtatc
4621 agccagagta gcaagtaatt tttgttttat aaatcatagt atctgtcatc ttgcagtatt
4681 accaatgctg ttgtaaattg aatttaaagt ggtattaaaa aaaactgtta aacaattttt
4741 atctgtttgt atatcttact atagattatg tacaagtaac atctaaataa aattacactt
4801 ttaacccaaa aaaaaaaaaa aaa
//