LOCUS BC050097 1753 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens leucine rich repeat containing 27, mRNA (cDNA clone
MGC:48601 IMAGE:5273395), complete cds.
ACCESSION BC050097
VERSION BC050097.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1753)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1753)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: e Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55741566.
FEATURES Location/Qualifiers
source 1..1753
/db_xref="H-InvDB:HIT000053395"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:48601 IMAGE:5273395"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1753
/gene="LRRC27"
/db_xref="GeneID:80313"
CDS 151..1302
/gene="LRRC27"
/codon_start=1
/product="LRRC27 protein"
/protein_id="AAH50097.1"
/db_xref="GeneID:80313"
/translation="MEGSSSYEVPSVAAADLEEGAGQTRSLPATPSKDVHKGVGGIIF
SSSPILDLSESGLCRLEEVFRIPSLQQLHLQRNALCVIPQDFFQLLPNLTWLDLRYNR
IKALPSGIGAHQHLKTLLLERNPIKMLPVELGSVTTLKALNLRHCPLEFPPQLVVQKG
LVAIQRFLRMWAVEHSLPRNPTSQEAPPVREMTLRDLPSPGLELSGDHASNQGAVNAQ
DPEGAVMKEKASFLPPVEKPDLSELRKSADSSENWPSEEEIRRFWKLRQEIVEHVKAD
VLGDQLLTRELPPNLKAALNIEKELPKPRHVFRRKTASSRSILPDLLSPYQMAIRAKR
LEESRAAALRELQEKQALMEQQRRPFLLIFPRVFQALTRSSGRFILVLL"
BASE COUNT 376 a 502 c 495 g 380 t
ORIGIN
1 ggcgtctcca tggcgaccgc gttggctggg tggcctccat tgtcgggctg ctgctctcag
61 cggcggggct cgccagcgct tcagtgggcg gggacgcggc aggtgactcc agaccaagga
121 ggatgagctg ctgtccctgg aagagaacgg atggagggaa gcagctccta cgaagttccc
181 tctgtggctg ctgctgatct ggaggagggt gctggtcaga ctaggagctt gcctgccacc
241 ccctccaaag atgttcacaa gggtgttgga ggcatcatct tttcctcctc accgatttta
301 gacttgagtg aaagtggtct gtgccgtttg gaggaggtct ttagaatccc cagccttcaa
361 caattgcatc tgcaaaggaa tgccctgtgt gtgattcctc aagatttctt tcagttgctt
421 ccgaacctga cttggctgga cctccggtac aatagaatta aagcgcttcc ttctgggatt
481 ggagctcacc agcatttgaa aactttgctt ttagaaagaa atcctatcaa aatgttacct
541 gtggagctgg ggagcgtaac cacgctgaaa gcactgaacc taagacactg ccctctggaa
601 ttccctcctc agctcgttgt gcagaaggga ttggtggcta tccagcgctt cctgcggatg
661 tgggcagtag aacactctct ccccagaaat ccaacttctc aagaggctcc accggttaga
721 gagatgaccc tccgtgacct cccgagccca ggactggagt tgtctggaga ccacgcgtct
781 aaccaaggag ctgtgaacgc tcaggaccca gagggggctg tgatgaaaga gaaggccagc
841 tttctcccgc ctgtggaaaa gccagacctg agtgaactca ggaagtctgc ggactcctca
901 gagaactggc ccagcgagga ggagatcagg cgcttttgga agctgaggca ggagattgtt
961 gagcacgtga aggcagacgt tctgggagat cagctcttga cgagggaatt acctccaaat
1021 ctcaaggcgg ccttgaacat tgagaaagaa ctaccaaagc caagacacgt tttcagaagg
1081 aagacagcct cctccaggag catcttaccc gacctcttgt caccgtacca aatggcgatc
1141 cgagcaaaaa gactggaaga gagccgagcg gcggcgctcc gagagctcca ggagaagcag
1201 gctctgatgg agcagcagag acgtcctttc ctcctcattt tccctagagt attccaggcc
1261 ctgacacggt catcagggag gttcattctt gtgttgctgt gactgccgcc agtgccacca
1321 ccttgcgagg tgtgttggcc gatggactcg gtgtcctcag tgtcttctct gtcctccagc
1381 tccactgacc acctggcttc acccctccct gggccccagg agtccggctg gcatggacca
1441 cagccacagc acccccgtgc ccctcacttg gtggttggct ttggccagcg ggggccccca
1501 gcaggaggtc gaggaggaag ggagagcgag ggcctcgtct ttactttccc ggcttctttg
1561 tgagctgcct ggagctggcc gagtccagcc tctccctcct tctgggttcc gacaatctct
1621 ccttccctgg tctgtcctgt gggcggctgc agcccggccc tgactggcac agggctcttg
1681 caccgcccct gtggctcacc tgctccctcc ccaacatgaa taaaccctcc tgaagccaaa
1741 aaaaaaaaaa aaa
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