LOCUS BC050072 2769 bp mRNA linear HUM 26-JUN-2007 DEFINITION Homo sapiens forkhead box G1, mRNA (cDNA clone MGC:48322 IMAGE:5284335), complete cds. ACCESSION BC050072 VERSION BC050072.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2769) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2769) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 91 Row: g Column: 6. FEATURES Location/Qualifiers source 1..2769 /db_xref="H-InvDB:HIT000053392" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:48322 IMAGE:5284335" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2769 /gene="FOXG1" /gene_synonym="BF1" /gene_synonym="BF2" /gene_synonym="FHKL3" /gene_synonym="HBF-1" /gene_synonym="HBF-2" /gene_synonym="HBF-3" /gene_synonym="HBF-G2" /gene_synonym="HBF2" /gene_synonym="HFK1" /gene_synonym="HFK2" /gene_synonym="HFK3" /gene_synonym="KHL2" /gene_synonym="QIN" /db_xref="GeneID:2290" /db_xref="HGNC:HGNC:3811" /db_xref="MIM:164874" CDS 370..1839 /gene="FOXG1" /gene_synonym="BF1" /gene_synonym="BF2" /gene_synonym="FHKL3" /gene_synonym="HBF-1" /gene_synonym="HBF-2" /gene_synonym="HBF-3" /gene_synonym="HBF-G2" /gene_synonym="HBF2" /gene_synonym="HFK1" /gene_synonym="HFK2" /gene_synonym="HFK3" /gene_synonym="KHL2" /gene_synonym="QIN" /codon_start=1 /product="forkhead box G1" /protein_id="AAH50072.1" /db_xref="GeneID:2290" /db_xref="HGNC:HGNC:3811" /db_xref="MIM:164874" /translation="MLDMGDRKEVKMIPKSSFSINSLVPEAVQNDNHHASHGHHNSHH PQHHHHHHHHHHHPPPPAPQPPPPPQQQQPPPPPPPAPQPPQTRGAPAADDDKGPQQL LLPPPPPPPPAAALDGAKAVGLGGKGEPGGGPGELAPVGPDEKEKGAGAGGEEKKGAG EGGKDGEGGKEGEKKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYY RENKQGWQNSIRHNLSLNMCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR STTSRAKLAFKRGARLTSTGLTFMDRAGSLYWPMSPFLSLHHPRASSTLSYNGTTSAY PSHPMPYSSVLTQNSLGNNHSFSTANGLSVDRLVNGEIPYATHHLTAAALAASVPCGL SVPCSGTYSLNPCSVNLLAGQTSYFFPHVPHPSMTSQSSTSMSARATSSSTSPQAPST LPCESLRPSLPSFTTGLSGGLSDYFTHQNQGSSSNPLIH" BASE COUNT 624 a 862 c 703 g 580 t ORIGIN 1 gagattgttt ggtactgttt tctctctggg cacctctcat ttcggaaggc catcagaggc 61 gcccactact gagcggcccc ggccgccgca gcagcacccg gagccccagt cccggtttcc 121 ccgcggtgcc ggagcccgga gctcgccgcc gcccaggcct caggaatcga aggggtggtt 181 gctgcttttg ctacatgact tgccagcgcc cgagcctgcg gtccaactgc gctgctgccg 241 tagcgctcag tgccgccgct gccgcccgcg ccccccgcgc ccagttcggc acccaccggt 301 cgccgccgcc cgccgcgccg ctgtcccgct cccgcgccgc cgccgccatt tccccccgac 361 gactgggtga tgctggacat gggagatagg aaagaggtga aaatgatccc caagtcctcg 421 ttcagcatca acagcctggt gcccgaggcg gtccagaacg acaaccacca cgcgagccac 481 ggccaccaca acagccacca cccccagcac caccaccacc accaccacca tcaccaccac 541 ccgccgccgc ccgccccgca accgccgccg ccgccgcagc agcagcagcc gccgccgccg 601 ccgcccccgg caccgcagcc cccccagacg cggggcgccc cggccgccga cgacgacaag 661 ggcccccagc agctgctgct cccgccgccg ccaccgccac caccggccgc cgccctggac 721 ggggctaaag cggtcgggct gggcggcaag ggcgagccgg gcggcgggcc gggggagctg 781 gcgcccgtcg ggccggacga gaaggagaag ggcgccggcg ccggggggga ggagaagaag 841 ggggcgggcg agggcggcaa ggacggggag gggggcaagg agggcgagaa gaagaacggc 901 aagtacgaga agccgccgtt cagctacaac gcgctcatca tgatggccat ccggcagagc 961 cccgagaagc ggctcacgct caacggcatc tacgagttca tcatgaagaa cttcccttac 1021 taccgcgaga acaagcaggg ctggcagaac tccatccgcc acaatctgtc cctcaacatg 1081 tgcttcgtga aggtgccgcg ccactacgac gacccgggca agggcaacta ctggatgctg 1141 gacccgtcga gcgacgacgt gttcatcggc ggcaccacgg gcaagctgcg gcgccgctcc 1201 accacctcgc gggccaagct ggccttcaag cgcggtgcgc gcctcacctc caccggcctc 1261 accttcatgg accgcgccgg ctccctctac tggcccatgt cgcccttcct gtccctgcac 1321 cacccccgcg ccagcagcac tttgagttac aacggcacca cgtcggccta ccccagccac 1381 cccatgccct acagctccgt gttgactcag aactcgctgg gcaacaacca ctccttctcc 1441 accgccaacg gcctgagcgt ggaccggctg gtcaacgggg agatcccgta cgccacgcac 1501 cacctcacgg ccgccgcgct agccgcctcg gtgccctgcg gcctgtcggt gccctgctct 1561 gggacctact ccctcaaccc ctgctccgtc aacctgctcg cgggccagac cagttacttt 1621 ttcccccacg tcccgcaccc gtcaatgact tcgcagagca gcacgtccat gagcgccagg 1681 gccacgtcct cctccacgtc gccgcaggcc ccctcgaccc tgccctgtga gtctttaaga 1741 ccctctttgc caagttttac gacgggactg tctgggggac tgtctgatta tttcacacat 1801 caaaatcagg ggtcttcttc caacccttta atacattaac atccctggga ccagactgta 1861 agtgaacgtt ttacacacat ttgcattgta aatgataatt aaaaaaataa gtccaggtat 1921 tttttattaa gcccccccct cccatttctg tacgtttgtt cagtctctag ggttgtttat 1981 tattctaaca aggtgtggag tgtcagcgag gtgcaatgtg gggagaatac attgtagaat 2041 ataaggtttg gaagtcaaat tatagtagaa tgtgtatcta aatagtgact gctttgccat 2101 ttcattcaaa cctgacaagt ctatctctaa gagccgccag atttccatgt gtgcagtatt 2161 ataagttatc atggaactat atggtggacg cagaccttga gaacaaccta aattatgggg 2221 agaattttaa aatgttaaac tgtaatttgt atttaaaaag cattcgtagt aaaggtgccc 2281 aagaaattat tttggccatt tattgttttg tccttttctt taaagaactg tttttttttc 2341 ttttgtttac ttttagacca aagattgggt tctagaaaat gcacttggta tactaagtat 2401 taaaacaaac aaaaaggaga gttgtttcag ttggcaacac tgcccattca attgaatcag 2461 aaggggacaa aattaacgat tgccttcagt ttgtgttgtg tatattttga tgtatgtggt 2521 cactaacagg tcacttttat tttttctaaa tgtagtgaaa tgttaatacc tattgtactt 2581 ataggtaaac cttgcaaata tgtaacctgt gttgcgcaaa tgccgcataa atttgagtga 2641 ttgttaatgt tgtcttaaaa tttcttgatt gtgatactgt ggtcatatgc ccgtgtttgt 2701 cacttacaaa aatgtttact atgaacacac agaaataaaa aataggctaa atccaaaaaa 2761 aaaaaaaaa //