LOCUS BC050036 2622 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens casein kinase 2, alpha 1 polypeptide, mRNA (cDNA clone
MGC:51015 IMAGE:5298655), complete cds.
ACCESSION BC050036
VERSION BC050036.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2622)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2622)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 91 Row: j Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47419902.
FEATURES Location/Qualifiers
source 1..2622
/db_xref="H-InvDB:HIT000099107"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51015 IMAGE:5298655"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2622
/gene="CSNK2A1"
/gene_synonym="CK2A1"
/gene_synonym="CKII"
/gene_synonym="CKII alpha"
/db_xref="GeneID:1457"
/db_xref="HGNC:HGNC:2457"
/db_xref="MIM:115440"
CDS 168..1361
/gene="CSNK2A1"
/gene_synonym="CK2A1"
/gene_synonym="CKII"
/gene_synonym="CKII alpha"
/codon_start=1
/product="CSNK2A1 protein"
/protein_id="AAH50036.1"
/db_xref="GeneID:1457"
/db_xref="HGNC:HGNC:2457"
/db_xref="MIM:115440"
/translation="MSGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRK
LGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVK
DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH
NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL
GCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRH
SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM
GSSSMPGGSTPVSSANMMSGISSVPTPSPLGPLAGSPVIAAANPLGCLFQLPLRSAVT
ALSVS"
BASE COUNT 724 a 588 c 574 g 736 t
ORIGIN
1 atgttgtctg tgtgagcaga ggggagagcg gccgccgccg ctgccgcttc caccacagtt
61 tgaagaaaac aggtctgaaa caaggtctta cccccagctg cttctgaaca cagtgactgc
121 cagatctcca aacatcaagt ccagctttgt ccgccaacct gtctgacatg tcgggacccg
181 tgccaagcag ggccagagtt tacacagatg ttaatacaca cagacctcga gaatactggg
241 attacgagtc acatgtggtg gaatggggaa atcaagatga ctaccagctg gttcgaaaat
301 taggccgagg taaatacagt gaagtatttg aagccatcaa catcacaaat aatgaaaaag
361 ttgttgttaa aattctcaag ccagtaaaaa agaagaaaat taagcgtgaa ataaagattt
421 tggagaattt gagaggaggt cccaacatca tcacactggc agacattgta aaagaccctg
481 tgtcacgaac ccccgccttg gtttttgaac acgtaaacaa cacagacttc aagcaattgt
541 accagacgtt aacagactat gatattcgat tttacatgta tgagattctg aaggccctgg
601 attattgtca cagcatggga attatgcaca gagatgtcaa gccccataat gtcatgattg
661 atcatgagca cagaaagcta cgactaatag actggggttt ggctgagttt tatcatcctg
721 gccaagaata taatgtccga gttgcttccc gatacttcaa aggtcctgag ctacttgtag
781 actatcagat gtacgattat agtttggata tgtggagttt gggttgtatg ctggcaagta
841 tgatctttcg gaaggagcca tttttccatg gacatgacaa ttatgatcag ttggtgagga
901 tagccaaggt tctggggaca gaagatttat atgactatat tgacaaatac aacattgaat
961 tagatccacg tttcaatgat atcttgggca gacactctcg aaagcgatgg gaacgctttg
1021 tccacagtga aaatcagcac cttgtcagcc ctgaggcctt ggatttcctg gacaaactgc
1081 tgcgatatga ccaccagtca cggcttactg caagagaggc aatggagcac ccctatttct
1141 acactgttgt gaaggaccag gctcgaatgg gttcatctag catgccaggg ggcagtacgc
1201 ccgtcagcag cgccaatatg atgtcaggga tttcttcagt gccaacccct tcaccccttg
1261 gacctctggc aggctcacca gtgattgctg ctgccaaccc ccttggatgc ctgttccagc
1321 tgccgctgcg ctcagcagta acggccctat ctgtctcctg atgcctgagc agaggtgggg
1381 gagtccaccc tctccttgat gcagcttgcg cctggcgggg aggggtgaaa cacttcagaa
1441 gcaccgtgtc tgaaccgttg cttgtggatt tatagtagtt cagtcataaa aaaaaaatta
1501 taataggctg attttctttt ttcttttttt ttttaactcg aacttttcat aactcagggg
1561 attccctgaa aaattacctg caggtggaat atttcatgga caaatttttt tttctcccct
1621 cccaaattta gttcctcatc acaaaagaac aaagataaac cagcctcaat cccggctgct
1681 gcatttaggt ggagacttct tcccattccc accattgttc ctccaccgtc ccacacttta
1741 gggggttggt atctcgtgct cttctccaga gattacaaaa atgtagcttc tcaggggagg
1801 caggaagaaa ggaaggaagg aaagaaggaa gggaggaccc aatctatagg agcagtggac
1861 tgcttgctgg tcgcttacat cactttactc cataagcgct tcagtggggt tatcctagtg
1921 gctcttgtgg aagtgtgtct tagttacatc aagatgttga aaatctaccc aaaatgcaga
1981 cagatactaa aaacttctgt tcagtaagaa tcatgtctta ctgatctaac cctaaatcca
2041 actcatttat acttttattt ttagttcagt ttaaaatgtt gataccttcc ctcccaggct
2101 ccttaccttg gtcttttccc tgttcatctc ccaacatgct gtgctccata gctggtagga
2161 gagggaaggc aaaatctttc ttagttttct ttgtcttggc cattttgaat tcattcagtt
2221 actgggcata acttactgct ttttacaaaa gaaacaaaca ttgtctgtac aggtttcatg
2281 ctagagctaa tgggagatgt ggccacactg acttccattt taagctttct accttctttt
2341 cctccgaccg tccccttccc tcacatgcca tccagtgaga agacctgctc ctcagtcttg
2401 taaatgtatc ttgagaggta ggagcagagc cactatctcc attgaagctg aaatggtaga
2461 cctgtaattg tgggaaaact ataaactctc ttgttacagc cccgccaccc cttgctgtgt
2521 gtatatatat aatactttgt ccttcatatg tgaaagatcc agtgttggaa ttctttggtg
2581 taaataaacg tttggtttta tttatcaaaa aaaaaaaaaa ga
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