LOCUS       BC049367                3845 bp    mRNA    linear   HUM 19-MAR-2009
DEFINITION  Homo sapiens SET and MYND domain containing 2, mRNA (cDNA clone
            MGC:57151 IMAGE:4826617), complete cds.
ACCESSION   BC049367
VERSION     BC049367.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3845)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3845)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (28-MAR-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 106 Row: e Column: 7
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 9910273
            The stop codon of the CDS annotated on this record is located > 55
            bases upstream of a splice junction, and therefore the mRNA is
            predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES             Location/Qualifiers
     source          1..3845
                     /db_xref="H-InvDB:HIT000099072"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:57151 IMAGE:4826617"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..3845
                     /gene="SMYD2"
                     /gene_synonym="HSKM-B"
                     /gene_synonym="KMT3C"
                     /gene_synonym="ZMYND14"
                     /db_xref="GeneID:56950"
                     /db_xref="HGNC:HGNC:20982"
                     /db_xref="MIM:610663"
     CDS             154..1269
                     /gene="SMYD2"
                     /gene_synonym="HSKM-B"
                     /gene_synonym="KMT3C"
                     /gene_synonym="ZMYND14"
                     /codon_start=1
                     /product="SMYD2 protein"
                     /protein_id="AAH49367.2"
                     /db_xref="GeneID:56950"
                     /db_xref="HGNC:HGNC:20982"
                     /db_xref="MIM:610663"
                     /translation="MRAEGLGGLERFCSPGKGRGLRALQPFQVGDLLFSCPAYAYVLT
                     VNERGNHCEYCFTRKEGLSKCGRCKQAFYCNVECQKEDWPMHKLECSPMVVFGENWNP
                     SETVRLTARILAKQKIHPERTPSEKLLAVKEFESHLDKLDNEKKDLIQSDIAALHHFY
                     SKHLEFPDSDSLVVLFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYK
                     GTLAEVRAVQEIKPGEEVFTSYIDLLYPTEDRNDRLRDSYFFTCECQECTTKDKDKAK
                     VEIRKLSDPPKAEAIRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFED
                     SNVYMLHMMYQAMGVCLYMQDWEGALQYGQKIIKPYR"
BASE COUNT         1004 a          919 c          958 g          964 t
ORIGIN      
        1 gggcgccctc ccttccgggg agcggggagc cgccgccgcg tccgccgggc ggctcccacc
       61 ccgccccccg cagctctagg tgacgcgtct ccaataacag ctcgccggga gccgcagctc
      121 gggcacagcc ggcggccgcg ccccgccgcc accatgaggg ccgagggcct cggcggcctg
      181 gagcgcttct gcagcccggg caaaggccgg gggctgcggg ctctgcagcc cttccaggtg
      241 ggggacttgc tgttctcctg cccggcctat gcctacgtgc tcacggtcaa cgagcggggc
      301 aaccactgcg agtactgctt caccaggaaa gaaggattgt ccaaatgtgg aagatgcaag
      361 caggcatttt actgcaatgt ggagtgtcag aaagaagatt ggcccatgca caagctggaa
      421 tgttctccca tggttgtttt tggggaaaac tggaatccct cggagactgt aagactaaca
      481 gcaaggattc tggccaaaca gaaaatccac ccagagagaa caccttcgga aaaattgtta
      541 gctgtgaagg agtttgaatc acatctggat aagttagaca atgagaagaa ggatttgatt
      601 cagagtgaca tagctgctct ccatcacttt tactccaagc atctcgaatt ccctgacagt
      661 gatagcctcg tagtactctt tgcacaggtt aactgtaatg gcttcacaat tgaagatgaa
      721 gaactttctc atttgggatc agcgatattt cctgatgttg cattgatgaa tcatagctgt
      781 tgccccaatg tcattgtgac ctacaaaggg accctggcag aagtcagagc tgtacaggaa
      841 atcaagccgg gagaggaggt ttttaccagc tatattgatc tcctgtaccc aacggaagat
      901 agaaatgacc ggttaagaga ttcttatttc tttacctgtg agtgccagga gtgtaccacc
      961 aaggacaagg ataaggccaa ggtggaaatc cggaagctca gcgatccccc aaaggcagaa
     1021 gccatccgag acatggtcag atatgcacgc aacgtcattg aagagttccg gagggccaag
     1081 cactataaat cccctagtga gctgctggag atctgcgagc tcagccagga gaagatgagc
     1141 tctgtgtttg aggacagtaa cgtgtacatg ttgcacatga tgtaccaggc catgggtgtc
     1201 tgcttgtaca tgcaggactg ggaaggagcc ctgcaatatg gacagaaaat cattaagccc
     1261 tacaggtgat tgcagaggct gttctaatca tccacggagt ggaatttggt tgtttagaat
     1321 gtatacgata gtgtcatctt cctgcccatt gctgagactt gcctagcgca gctgcctctt
     1381 ctctgcaccc acatctggag gtgctggtgc agggcactgc tcccgagtca ggcctgttct
     1441 caccaccatc ccaaggagac aggttgaggt tatgcagcgg atactggggc aagatccctc
     1501 ccaggtccat ccagggccat atccatagta gttaactcag gctagttttg agaagccact
     1561 agtttgcttc ttttcccacc cactgcttcc aagtttaatt actaagtggt ggtctcagaa
     1621 accctggttt tcatcattac tcacaccatc cccttctttt gctttttcaa attacagccc
     1681 cagtttgcaa atggggaagc tctgggacca gtgggttgac cgtggttatc taatctcccc
     1741 accccaggtt tggaaaaaag aaacaaaaat tgctttttaa tttgtagtaa taatgaatat
     1801 tagccctgga gagatttcct gcctgagagg gttactaaac ctaaaagtgg gtgacagacg
     1861 gaagttgtgg ctttgtcctc tgactcggac tagacacttc agggctgagg tggcctagat
     1921 gggatcactg gagctctttt taaaggcact gatattatgc atttacaggg tacgtccaac
     1981 accaagtggg ccaagtgaat cagggtcgct gggcattaga cccagaaatc tgtgttctgg
     2041 aagcatccca ggtgtttctc aggagtttga gaagccctca gtctccttcc acttcggaga
     2101 ttagggtctg tgaaggttgt gtctggtctg aatgtccact gcccactcca ccctctactt
     2161 accccactgt gccctgatta gccagcaggg ggagcccaaa ggaagccagc tcttaaaatc
     2221 tgctcttgga aacagaattt gttaaattgg ggataaactc aaaccttcct tttctcctag
     2281 agtgtgtgag gaagtgcact ggcctcatgc gcagttctct gtgtgagatc tgtagggaga
     2341 gaggagcaga cagacagcat cccagccctg tggttctccc agcagggcct tgctctgcta
     2401 gacccatctt tatctgcgtg agcccctccc ggaagcccag ctctggtctt ctgtggggcc
     2461 gtgggtccca gggctgcctc ctacccagga atacagctag aacatgtctt tttggactga
     2521 ctttcaggag acacagggtg gaacagccta gcctttaaat aaacacctct tacacacatg
     2581 taaacacaca cactggctca cccaccagct gcctctgggc cctgttctta gggaaatggc
     2641 tgtttcccag gcagacccca tcagtcagtc ttcaggtaca gccggagaga acacttgctg
     2701 tatctaaagc ccctgctgga caatggggaa agaacatcca gaagacacag gaagtgttct
     2761 gacttcagag cacttaactg ttttgctaaa ccaacccata tcatagtgtg acagaaagct
     2821 ggggtcttaa gacacattgg ggtgggtggg ggttgggtgg gtggctgtat gtctgagtac
     2881 ctaaggtgat aggcctaatt gctgccttca taaatgggac atttacttca caagctgttt
     2941 tcccagggtc ttcctctggg tatgtctgaa atataaaaat ctggactggg attgaagatt
     3001 gtgtttacaa atgcttttga ataggatttt ctcctgcagt tgttacgtag cttttcagaa
     3061 acacacaaac tacaaataat gaacaacatc tgcaatgatt cggcagggtg gcagcatcca
     3121 cgctctccac ccaaaccctg gtgggatttg gagaggccgc tggtgggcag aggttggccc
     3181 taagcatggc agcctccggc ttactgcacc cagcctgtgg ggcggctcag tagccgctga
     3241 catggtggcc tgttgtctct tctcttgttc tagtaagcac tatcctttgt actccctcaa
     3301 cgtggcctcc atgtggttga agctagggag actctacatg ggcctggaac acaaagccgc
     3361 aggggagaaa gccctgaaga aggccattgc aatcatggaa gtagctcacg gcaaagatca
     3421 tccatatatt tctgagatca aacaggaaat tgaaagccac tgaaactatg cagcatttca
     3481 gttttcattt aaacacttag ttcagaaacc ttaaaggatt tgaatatttc aaattgcaca
     3541 cgtcactcca gcatctctgt aaaataattg gaatgaaaat acttcttgca cttaaacact
     3601 gcacatgccg tactttgagg ttagtctgaa tcttgaactt taataccaaa ttaattttga
     3661 atgcttttgt ttcctaagag ataatggcat ggtttcatat gttatacttt ggacagacag
     3721 agttttaaaa atggaattat tttttctttc atgcctcttg taatgttctg aacaaacttg
     3781 aatgatgaaa gtattaaaga gatatcagta aaaaaaaaaa aaaaaaaaag aaaaaaaaaa
     3841 aaaaa
//