LOCUS BC049216 2373 bp mRNA linear HUM 16-AUG-2008 DEFINITION Homo sapiens AHNAK nucleoprotein 2, mRNA (cDNA clone IMAGE:5502765), complete cds. ACCESSION BC049216 VERSION BC049216.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2373) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2373) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 93 Row: n Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..2373 /db_xref="H-InvDB:HIT000053366" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5502765" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2373 /gene="AHNAK2" /db_xref="GeneID:113146" /db_xref="HGNC:HGNC:20125" /db_xref="MIM:608570" CDS 99..1550 /gene="AHNAK2" /codon_start=1 /product="AHNAK2 protein" /protein_id="AAH49216.1" /db_xref="GeneID:113146" /db_xref="HGNC:HGNC:20125" /db_xref="MIM:608570" /translation="MRLPETQVLPGEIDETPLSKPGHDLASMEDKTEKWSSQPEGPLK LKASSTDMPSQISVVNVDQLWEDSVLTVKFPKLMVPRFSFAAPSSEDDVFIPTVREVQ CPEANIDTALCKESPGLWGASILKAGAGVPGEQPVDLNLPLEAPPISKVRVHIQGAQV ESQEVTIHSIVTPEFVDLSVPRTFSTQIVRESEIPTSEIQTPSYGFSLLKVKIPEPHT QARVYTTMTQHSRTQEGTEEAPIQATPGVDSISGDLQPDTGEPFEMISSSVNVLGQQT LTFEVPSGHQLADSCSDEEPAEILEFPPDDSQEATTPLADEGRAPKDKPESKKSGLLW FWLPNIGFSSSVDETGVDSKNDVQRSAPIQTQPEARPEAELPKKQEKAGWFRFPKLGF SSSPTKKSKSTEDGAELEEQKLQEETITFFDARESFSPEEKEEGELIGPVGTGLDSRV MVTSAARTELILPEQDRKADDESKGSGLGPNEG" BASE COUNT 673 a 594 c 567 g 539 t ORIGIN 1 tgcacctttc cactgctggg atgactgggg atgagctttc cacttctgag gtcaggatcc 61 atccatccaa aggacctctc ccttttcaga tgcctggcat gaggcttcca gaaacccagg 121 ttcttccagg agaaatagat gagactcctc tttccaagcc aggacatgac cttgccagca 181 tggaggataa aacagagaaa tggtcttccc agcctgaagg tccacttaaa ttgaaagctt 241 caagtactga tatgccatcc cagatttctg tggttaatgt ggatcaactg tgggaagatt 301 ctgtcctaac tgtcaaattc cccaaattaa tggtaccaag gttctccttc gctgccccca 361 gctcagagga tgatgtgttc atccccactg tgagggaagt gcagtgtcca gaggccaata 421 ttgatacagc cctttgtaag gaaagtccgg ggctctgggg agccagcatc ctgaaggcag 481 gtgctggggt ccctggggag cagcctgtgg accttaacct gcctttggaa gctcccccaa 541 tttcaaaggt cagagtgcat attcagggtg ctcaggttga aagtcaagag gtcactatac 601 acagcatagt gacaccagag tttgtagatc tctcagtacc caggactttt tccactcaga 661 ttgtgcggga atcagagatc cccacgtcag agattcaaac accttcgtac ggattttcct 721 tattaaaagt gaaaatccca gagccccaca cgcaggctag agtgtacaca acaatgactc 781 aacactctag gactcaggag ggcacagaag aggctcccat acaagccacc ccaggagtag 841 actccatttc tggagatctc cagcctgaca ctggagaacc atttgagatg atctcttcca 901 gcgtcaatgt actgggacag caaacactca catttgaagt tccttctggc caccagcttg 961 cagacagctg ttcagatgag gagccagcag aaattcttga gtttccccct gatgatagcc 1021 aagaggcaac cacaccactg gcagatgaag gcagggctcc aaaagacaaa ccagaaagta 1081 aaaaatctgg tctgctctgg ttttggcttc caaacattgg gttttcctct tctgttgatg 1141 agacaggtgt tgattccaaa aatgacgtcc agagatctgc tcccattcaa acacagcctg 1201 aggcacgacc agaggcagaa ctgcctaaaa aacaggagaa ggcaggctgg ttccgatttc 1261 ccaaattagg gttctcctca tctcctacca agaaaagcaa aagcaccgaa gatggggcag 1321 agctggaaga acaaaaactt caagaagaaa caatcacgtt ttttgatgcc cgagaaagtt 1381 tctcccctga agagaaggaa gagggtgaac tgatcgggcc tgtgggcact gggctggact 1441 ccagagtgat ggtgacatcc gcggcaagaa cagagttaat cctgcccgag caggacagaa 1501 aagctgacga tgaaagcaaa gggtcaggcc tgggaccaaa tgaaggctga gaggtatggc 1561 tcatcggtac aagagagatg caaaaaacta agttggaaag taaaggctac acacacatat 1621 ggagcacccc atcccacagc acattacatc cacctcactt cacagaacgg agaacagagc 1681 agaaatgacc agaacacctt tgtcaccatc acacagccct cctaaaatgg aaccaaagct 1741 tcccagctcc ctcaaagctt tggatgcaaa gaaggcaccc tgacttccac aagacaccag 1801 aattcacacg gtactcagag gcactgctgg ggaagtttgt tggtctttat tagataaatt 1861 tccagagacc tgtccataat acccaacaga acatgactgt ttctttgagg aaagggttat 1921 aatgtctgtg gtgtacaagt cgtttttggt ataacttctt tcctgctgct gctgcttccc 1981 ggcaaacata gttttcctat ttcaggcaga gtgcggtata ttccaggaaa cactgtttcc 2041 tactcactta gcttacttct ttgttgaatg cctcactaat ggcaagtttc aagatgtttt 2101 gggtgacaat gcacacatgc tgggcaaaag ggtgatggcc agtggctggc agctgggcca 2161 gcagaagcta ggacatctgt gagttgtcat tctcatctat ccatgtccac tggcctgcca 2221 gcatccgcca gtgccttgcc agtgtgcacg gtcccacact gtggcccctg agtcccctaa 2281 tgtacacgct gcagccagaa tgcagatgga gctggcttgg ctgttccctg gatgggcaat 2341 aaagaaagtg ctgcatccca aaaaaaaaaa aaa //