LOCUS BC048980 1929 bp mRNA linear HUM 19-JUN-2006 DEFINITION Homo sapiens protein kinase, AMP-activated, alpha 1 catalytic subunit, mRNA (cDNA clone MGC:57364 IMAGE:4839033), complete cds. ACCESSION BC048980 VERSION BC048980.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1929) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1929) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (17-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 106 Row: g Column: 12. FEATURES Location/Qualifiers source 1..1929 /db_xref="H-InvDB:HIT000053348" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:57364 IMAGE:4839033" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1929 /gene="PRKAA1" /gene_synonym="1" /gene_synonym="alpha" /gene_synonym="AMPK" /gene_synonym="AMPKa1" /gene_synonym="MGC33776" /gene_synonym="MGC57364" /db_xref="GeneID:5562" /db_xref="HGNC:HGNC:9376" /db_xref="MIM:602739" CDS 186..1910 /gene="PRKAA1" /gene_synonym="1" /gene_synonym="alpha" /gene_synonym="AMPK" /gene_synonym="AMPKa1" /gene_synonym="MGC33776" /gene_synonym="MGC57364" /codon_start=1 /product="protein kinase, AMP-activated, alpha 1 catalytic subunit" /protein_id="AAH48980.1" /db_xref="GeneID:5562" /db_xref="HGNC:HGNC:9376" /db_xref="MIM:602739" /translation="MRRLSSWRKLATAEKQKHDGRVKIGHYILGDTLGVGTFGKVKVG KHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM VMEYVSGGELFDYICKNGRKSDVPGVVKTGSTKELDEKESRRLFQQILSGVDYCHRHM VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG PEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQ VDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVL SCLYNRNHQDPLAVAYHLIIDNRRIMNEAKDFYLATSPPDSFLDDHHLTRPHPERVPF LVAETPRARHTLDELNPQKSKHQGVRKAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEW KVVNPYYLRVRRKNPVTSTYSKMSLQLYQVDSRTYLLDFRSIDDEITEAKSGTATPQR SGSVSNYRSCQRSDSDAEAQGKSSEVSLTSSVTSLDSSPVDLTPRPGSHTIEFFEMCA NLIKILAQ" BASE COUNT 576 a 427 c 446 g 480 t ORIGIN 1 attctcctgg cagcccccgc ccgccccgcc agggggagcg tctgcgcccg acgtaggctg 61 cggggcctgg gctggcggcg cagggcggtg actcggctcg gtggctgccc tcccgcgtcc 121 ccaccccctc cccgcccgcc cccggcgcgg ccctgcccgc cccctccgcc ccctcccgca 181 gcgccatgcg cagactcagt tcctggagaa agttggcgac agccgagaag cagaaacacg 241 acgggcgggt gaagatcggc cactacattc tgggtgacac gctgggggtc ggcaccttcg 301 gcaaagtgaa ggttggcaaa catgaattga ctgggcataa agtagctgtg aagatactca 361 atcgacagaa gattcggagc cttgatgtgg taggaaaaat ccgcagagaa attcagaacc 421 tcaagctttt caggcatcct catataatta aactgtacca ggtcatcagt acaccatctg 481 atattttcat ggtgatggaa tatgtctcag gaggagagct atttgattat atctgtaaga 541 atggaaggaa atctgatgta cctggagtag taaaaacagg ctccacgaag gagctggatg 601 aaaaagaaag tcggcgtctg ttccaacaga tcctttctgg tgtggattat tgtcacaggc 661 atatggtggt ccatagagat ttgaaacctg aaaatgtcct gcttgatgca cacatgaatg 721 caaagatagc tgattttggt ctttcaaaca tgatgtcaga tggtgaattt ttaagaacaa 781 gttgtggctc acccaactat gctgcaccag aagtaatttc aggaagattg tatgcaggcc 841 cagaggtaga tatatggagc agtggggtta ttctctatgc tttattatgt ggaacccttc 901 catttgatga tgaccatgtg ccaactcttt ttaagaagat atgtgatggg atcttctata 961 cccctcaata tttaaatcct tctgtgatta gccttttgaa acatatgctg caggtggatc 1021 ccatgaagag ggccacaatc aaagatatca gggaacatga atggtttaaa caggaccttc 1081 caaaatatct ctttcctgag gatccatcat atagttcaac catgattgat gatgaagcct 1141 taaaagaagt atgtgaaaag tttgagtgct cagaagagga agttctcagc tgtctttaca 1201 acagaaatca ccaggatcct ttggcagttg cctaccatct cataatagat aacaggagaa 1261 taatgaatga agccaaagat ttctatttgg cgacaagccc acctgattct tttcttgatg 1321 atcatcacct gactcggccc catcctgaaa gagtaccatt cttggttgct gaaacaccaa 1381 gggcacgcca tacccttgat gaattaaatc cacagaaatc caaacaccaa ggtgtaagga 1441 aagcaaaatg gcatttagga attagaagtc aaagtcgacc aaatgatatt atggcagaag 1501 tatgtagagc aatcaaacaa ttggattatg aatggaaggt tgtaaaccca tattatttgc 1561 gtgtacgaag gaagaatcct gtgacaagca cttactccaa aatgagtcta cagttatacc 1621 aagtggatag tagaacttat ctactggatt tccgtagtat tgatgatgaa attacagaag 1681 ccaaatcagg gactgctact ccacagagat cgggatcagt tagcaactat cgatcttgcc 1741 aaaggagtga ttcagatgct gaggctcaag gaaaatcctc agaagtttct cttacctcat 1801 ctgtgacctc acttgactct tctcctgttg acctaactcc aagacctgga agtcacacaa 1861 tagaattttt tgagatgtgt gcaaatctaa ttaaaattct tgcacaataa acagaaaaaa 1921 aaaaaaaaa //