LOCUS BC048979 1925 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens Rieske (Fe-S) domain containing, mRNA (cDNA clone
MGC:57355 IMAGE:4838006), complete cds.
ACCESSION BC048979
VERSION BC048979.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1925)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1925)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: g Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255164.
FEATURES Location/Qualifiers
source 1..1925
/db_xref="H-InvDB:HIT000099036"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57355 IMAGE:4838006"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1925
/gene="RFESD"
/db_xref="GeneID:317671"
/db_xref="HGNC:HGNC:29587"
CDS 1418..1891
/gene="RFESD"
/codon_start=1
/product="Rieske (Fe-S) domain containing"
/protein_id="AAH48979.1"
/db_xref="GeneID:317671"
/db_xref="HGNC:HGNC:29587"
/translation="MNLDGSAQDPEKREYSSVCVGREDDIKKSERMTAVVHDREVVIF
YHKGEYHAMDIRCYHSGGPLHLGDIEDFDGRPCIVCPWHKYKITLATGEGLYQSINPK
DPSAKPKWCSKGIKQRIHTVTVDNGNIYVTLSNEPFKCDSDFYATGDFKVIKSSS"
BASE COUNT 553 a 415 c 420 g 537 t
ORIGIN
1 cgggaccagc tgcttccggc tgggctgcgg gcgtggactc ctcattccgg ctgtggccgc
61 gccgctgcgg ggcctgaggc cctcttgggt tttggttcag cgttagttaa cggttaaccc
121 gccaaggcgg gcttccgccc aggcacagga gactcaccga gcttgttcac cttgaaactt
181 gggccacacc tgagacctgc cacctaaggg gggtacgcgg gtcgttttta acaagctttc
241 atggcatttg tgccatgaaa gctctaaagt atagaagctg ctccagggct tccgcagccc
301 cggccgtcct ggagatactc gcctcctgga gtctgtgtcg agaatttgca gcacctggac
361 agccacgtgc agtctcagaa ctgcaggcgg tctttaccga aatgttaaac acaacttgaa
421 gttaggcagg ataactgcca gagctggatg gaccttagag gtgccagcta acgcgctgtg
481 agcgttttct gcggttaggc ctgctctaaa catttgacat gtgttaaagc atttatgtgc
541 tttacccaca cccctatgtg gcgggccctt cttaaagtaa aagaaactgc agcacagcga
601 agttaagcaa cttgccccaa atcacgcaga actgggatgc aaacccaggt ctagctcact
661 cgtgatcaca attcaacatc atacgatggt gctgatttcc agagcagctc tgtgacttta
721 tataaaatta ttgggcaagc gttcaattgt aaacattcgt gaacatagct gttgcacatt
781 agcgttcctt ttttttttta attcaggacc atctttggtg acaaatataa atatcaatac
841 tatatatatc accaatatac atatttgctt tgctaaaagg tttctgtgtc ttcaggatag
901 tttacttgca agcctcatgt ttttataaaa acgtgggtgc tacctgaata aaactaatgc
961 ctacccgttg gcggttttgt gaagactaat gaactattat attcaaaggg tccaagcagt
1021 aggcatttac taaaggacag ctagttttat ctgttattat tctgccattc agagagatac
1081 caaaactact ctctaaggca tttctcttcc ctgcatgtaa aagcaagggt gtcatacttg
1141 agataagcat tctgataatg tgtaggcaaa gtttccacac ttggtaaaag catcttagtc
1201 atggttcaag acgagtgaca agttaccacc tatttgcaat tcaaggagaa tataagacag
1261 agaagaaagc tgtgaatgaa tttcatttga ttagcaatag attggacact ctactgatct
1321 tgcctctcta caacctctct tccacctgac ctctaaatgt tgaagtgttt caggaattgt
1381 cttagacctt cttccttatc tacacttcct ctccaacatg aatcttgatg gctctgcaca
1441 agatcctgaa aagagggaat attcttctgt gtgtgtgggc agagaagatg acattaaaaa
1501 atctgaaaga atgacagctg ttgtccatga tagagaagtg gtcattttct accacaaggg
1561 agaatatcat gctatggata ttcgctgtta ccactcagga ggacctttac atttgggaga
1621 tatagaggat tttgatggac gaccgtgtat agtttgcccc tggcataaat acaaaattac
1681 tttggcaaca ggagaaggtc tgtaccagtc tataaaccct aaagatccat cagcaaaacc
1741 caagtggtgc tccaaaggaa taaagcaaag gattcacaca gtgacagtag acaacggaaa
1801 tatttatgtg actctttcta atgaaccttt taagtgtgac tctgattttt atgccactgg
1861 agacttcaaa gtaattaaga gttcttcctg ataaaaaata tatagaaatg aaaaaaaaaa
1921 aaaaa
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