LOCUS BC048969 3259 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens TSPY-like 1, mRNA (cDNA clone MGC:57205
IMAGE:5297724), complete cds.
ACCESSION BC048969
VERSION BC048969.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3259)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3259)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: p Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein.
FEATURES Location/Qualifiers
source 1..3259
/db_xref="H-InvDB:HIT000053346"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57205 IMAGE:5297724"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3259
/gene="TSPYL1"
/gene_synonym="SIDDT"
/db_xref="GeneID:7259"
/db_xref="MIM:604714"
CDS 101..1417
/gene="TSPYL1"
/gene_synonym="SIDDT"
/codon_start=1
/product="TSPYL1 protein"
/protein_id="AAH48969.1"
/db_xref="GeneID:7259"
/db_xref="MIM:604714"
/translation="MSGLDGVKRTTPLQTHSIIISDQVPSDQDAHQYLRLRDQSEATQ
VMAEPGEGGSETVALPPPPPSEEGGVPQDAAGRGGTPQIRVVGGRGHVAIKAGQEEGQ
PPAEGLAAASVVMAADRSLKKGVQGGEKALEICGAQRSASELTAGAEAEAEEVKTGKC
ATVSAAVAERESAEVVVKEGLAEKEVMEEQMEVEEQPPEGEEIEVAEEDRLEEEAREE
EGPWPLHEALRMDPLEAIQLELDTVNAQADRAFQQLEHKFGRMRRHYLERRNYIIQNI
PGFWMTAFRNHPQLSAMIRGQDAEMLRYITNLEVKELRHPRTGCKFKFFFRRNPYFRN
KLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTWFSDHSLPESDK
IAEIIKEDLWPNPLQYYLLREGVRRARRRPLREPVEIPRPFGFQSG"
BASE COUNT 826 a 750 c 833 g 850 t
ORIGIN
1 agtgagactg tagggtgggc ggtgcgagcg gcggttagct cccagttcgg cctctgagga
61 aaacgggcgt tcgcctgcgg ttggtccgac tgttagcaac atgagcggcc tggatggggt
121 caagaggacc actcccctcc aaacccacag catcattatt tctgaccaag tcccgagcga
181 ccaggacgca caccagtacc tgaggctccg cgaccaaagc gaggcgacac aggtgatggc
241 ggagccgggt gagggaggct cggagaccgt cgcgctcccg cctccaccgc cttcagagga
301 ggggggcgta ccccaggatg ccgcgggccg tggcggtact ccccagatcc gagttgttgg
361 gggtcgcggt catgtggcga tcaaagccgg gcaggaagag ggccagcctc ccgccgaagg
421 cctggcagcc gcttctgtgg tgatggcagc cgaccgcagc ctgaaaaagg gcgttcaggg
481 tggagagaag gccctagaaa tctgtggcgc ccagagatcc gcgtctgagc tgacggcggg
541 ggcggaggct gaggcggagg aggtgaagac aggaaagtgc gccaccgtct cagcagccgt
601 ggctgagagg gagagcgctg aggtggtggt gaaggaaggc ctggcggaga aggaggtaat
661 ggaggagcag atggaggtag aggagcagcc gccagaaggt gaagaaatag aagtggcgga
721 ggaggataga ttggaggagg aggcgaggga ggaagaaggg ccctggcctt tgcatgaggc
781 tctccgcatg gaccctctgg aggccatcca gctggaactg gacactgtga atgctcaggc
841 cgacagggcc ttccaacagc tggagcacaa gtttgggcgg atgcgtcgac actacctgga
901 gcggaggaac tacatcattc agaatatccc gggcttctgg atgactgctt ttcgaaacca
961 cccccagttg tccgccatga ttaggggcca agatgcagag atgttaaggt acataaccaa
1021 tttagaggtg aaggaactca gacaccctag aaccggttgc aagttcaagt tcttctttag
1081 aagaaacccc tacttcagaa acaagctgat tgtcaaggaa tatgaggtaa gatcctccgg
1141 ccgagtggtg tctctttcta ctccaattat atggcgcagg gggcatgaac cccagtcctt
1201 cattcgcaga aaccaagacc tcatctgcag cttcttcact tggttttcag accacagcct
1261 tccagagtcc gacaaaattg ctgagattat taaagaggat ctgtggccaa atccactgca
1321 atactacctg ttgcgtgaag gagtccgtag agcccgacgt cgcccgctaa gggagcctgt
1381 agagatcccc aggccctttg ggttccagtc tggttaacat ttgcccttgg gaatactcct
1441 gcacaaggtc tcctaccacc ttctgctgga cctgtgcttg ggcatcagca atgagtatgc
1501 cttctattgt gctttgtttt tgctgacttt tatgcaccct gtttcctttg gatattcagt
1561 tctctcaacc tcaagattga gacggtggtg ggtatgcttc tccacttcca tatgaccttc
1621 atgctgttct ggaatatcac atgctacgag gtcatccttc acactacttg taagccaagc
1681 aaatgatact gtagattgta ctgcctttat ctgcactgct tggaccctgt ttattcccag
1741 ggcctctgaa ctggttgctg tcacttggat ttctagcttt gggagcctgt tccacctact
1801 cagctctgca ttgagcagta tgggcacatg ccctgtggac agttactgga cgttaatgaa
1861 ctcagaggag aaaagcagtg agccacttgt tctgtgtgat ttatggtact tcattgctct
1921 tccttcacct ctagtcactt tctattgcta cctgccctac attggctcct gccaaggtcc
1981 ctctctctcc ctgttttcct tttttttttt tttttttttt tgagacggag gacggagtct
2041 tgctctgtcg cccaggttgg agtgcagtgg cgcgatctcg gctcactgca acctccacct
2101 cccgggttca agcgattctc ctgcctcagc ctcccgagta gctgggacta caggcgcgcg
2161 ccgccacgcc cggctaattt ttatattttt agtagagacg gggtttcacc atgctggcca
2221 ggctggtctc gaaccccgac ctcgtgatcc gccctcctta gcctcccaat cctctcttaa
2281 aaaagtgata gctcagaaac atttgtaaaa gcaaggtttt tatttcattt tggctctgtc
2341 attttcagag gcaaagaagt tggcctgtaa aatagagtgc tagagctctt acgcccctcc
2401 ccttcttccc aacttcctac ttcctagccc ttttatcaac tcctagaata gttaaagaga
2461 gacacatcta gatgggatga aaggtgccct aagcaggaga aactgaacaa aaggctagag
2521 gcatgggcca ggtaaaaatt gggcctagag tgaagactgt gctgtcgtta agagctttcg
2581 aggaaggagt acttactccc caatgatgat gaatggaaaa atacttttca gggagaattg
2641 aaggggttaa agtgttaaat atgttgccta gacaagggtt ctttaaagaa agacagcgca
2701 actttgaatg ctttcttact tgttttgtga cctaatttat gtggaagatt gttatttcat
2761 taggatttag taaaattttt ttttctgatt ctaaacttat tgtgaaaatt gagctgtaca
2821 gatattcttt tgatttcaat tgggaacatt tggaagaaca acagtcttac ttgcctgtac
2881 aatatagaga catatgaata gtcataacag ttttcaactt gttcttgttt ctgttaaact
2941 atattcctag aaacatagtt tgaacaactt ggtctttgtt aggcttgtca aattgccttc
3001 atggaaaaat aatctacaaa agtatggttt aattgattgt cttacatgat aattttccct
3061 ggtaacaact tagtaagtga tatatctttt ttcctaaatt gcttaaatac tgtgaaattg
3121 ctctgacaaa ttggaagtgt accattggca tatttgtctt cctttttatg catgatggta
3181 aaataaaagc atgttgttct gctaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3241 aacaaaaaaa aaaaaaaaa
//