LOCUS BC048964 3373 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens IQ motif containing H, mRNA (cDNA clone MGC:57142
IMAGE:5297681), complete cds.
ACCESSION BC048964
VERSION BC048964.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3373)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3373)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: p Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 12232474.
FEATURES Location/Qualifiers
source 1..3373
/db_xref="H-InvDB:HIT000053344"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:57142 IMAGE:5297681"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3373
/gene="IQCH"
/gene_synonym="DKFZp434F2114"
/gene_synonym="FLJ12476"
/db_xref="GeneID:64799"
/db_xref="HGNC:HGNC:25721"
CDS 48..3131
/gene="IQCH"
/gene_synonym="DKFZp434F2114"
/gene_synonym="FLJ12476"
/codon_start=1
/product="IQ motif containing H"
/protein_id="AAH48964.1"
/db_xref="GeneID:64799"
/db_xref="HGNC:HGNC:25721"
/translation="MAQNTENHDPVGSILIQIHEDLYQLKEKLTKFSPEEKGETLDIQ
SLETAIKRTEVGLRIHIEKYLNVVNQNVLTTSVNDESLYTPQASKWLLPTVIDQKSFI
FPQESEGTFWQPQRQHSSSLPVFPRAKIKVSKLIKGSNISSLTVLPSSHCTDPYFTPI
PVLQADAHKGILSMIERGLIPPTARITFQNPPITPRAAPLHSFDEARKIPTVATFTIP
REPPPSPAEVKFFPKKQRSKGKSRRSRGHHDRKAMKVKTPLRALKSLWDYDFLIYDGV
IDNTAPDFLAFKEHFSLAWGGIFSLLEHVEKFLRNYAIPEVKIKGNNLVALLPEFELT
NKLTRYDLLSVLEDPAHVQMLINLPGQRYKGQDGNSEAAMKIQATWKCYKARKFFLFY
RQQKWASGVIAIAWLLYCHKTRLKKILKESRQRHLENFRIRAKHLAANWNRIRTSRRT
IIHIPSLGYSQPVREHIADFNTQQNMQLGRLCDILDANVNVIYICSHHMNDELVLYYK
KILSLHAAVKSGNLEDRSDLQDRFKIITPEAVNIFPKHHMCLATHLMYSPKAIKRIKN
LIRGTEAYIVSGLLHRDDLAVADMLDIPILGSEPELAHLYSTKSGGKRVFDSANVAVP
PGIYDIYSQQQMIEQLSQLITDHLQIQRWLFKMDSEFRGNGTAFCDIPSYLKCYKWVL
KESSRYGLEDWRKKWAQEPALVKISEELAGILAQHAQPVNEKRFPTWRKFLQTFLSQG
GVIEAFPPADNVTNLTVDMLIEPNGKISVLSTGDQLHAESPFISSGTTVPQTSVDPQV
LTYLCLQIGKACRMRDVVGYFSIDLVTFIDPSTLEQQVWATGLNLAYSDQLALTQLTL
YLTNGHLDCSLSTLEVPRFVPKERKKTKCMSALSMPMLATSRYAVMTTQLRHSNLSLV
FHYVFLQICRAHGIGYDLEERQGTVFILYEHLKRHKLGMLTIGEDLQGVLMTFARHLF
IIHQEISAPNMQGETNFKTTIADIETILRVTKENKMRFEEEQQSKDDKNLSKPKK"
BASE COUNT 1057 a 757 c 720 g 839 t
ORIGIN
1 gcttggaaac cgcgcctccg cggaggtagc cgttccctga cctagccatg gcacagaaca
61 ctgaaaacca cgaccctgtc ggatccatct taatccagat ccatgaagac ctttatcagt
121 taaaggagaa attaacaaaa ttctcacctg aggaaaaagg agagactcta gacattcaga
181 gtcttgaaac agcaatcaaa aggactgaag tggggttaag aattcacatt gagaagtatt
241 taaatgttgt aaaccagaat gtattaacga cttctgttaa tgatgagagc ttatatactc
301 cccaggcttc caaatggtta cttccaactg taattgatca gaaatcattt attttccctc
361 aggaatctga gggtacattt tggcaacccc aaagacagca cagttcatct ctgcctgtct
421 ttccaagagc aaagataaag gtttcgaagt taatcaaagg gtctaacata tccagcctca
481 cggttctgcc atcttctcat tgcacagatc cctatttcac tcctatacca gtcttacaag
541 cagatgccca caaagggatt ttaagtatga tagaacgagg gctgattcca ccaacagcaa
601 ggattacctt tcagaatcca cccattacac ccagagcagc tcctctgcat agttttgatg
661 aagcacgtaa gattccaact gtagccactt tcactatacc tcgggaacca cctccatctc
721 cagcagaagt gaagttcttt cccaagaaac aaagatcaaa ggggaaaagc agaaggtcaa
781 gaggacatca tgataggaag gccatgaaag tcaaaacacc tttgagagcc ctgaaatcac
841 tgtgggatta tgacttttta atttatgatg gtgtcataga caatacagcc ccagacttct
901 tagcattcaa ggaacatttt agcttagctt ggggaggtat tttttctctc ttggaacacg
961 tcgagaagtt tctcaggaac tatgctatac cagaagtcaa aataaaaggg aataatttgg
1021 tggccctcct tccagagttt gagctgacga ataaacttac cagatatgac cttctctcag
1081 tgttagagga cccagctcat gtccaaatgc tgataaatct tccagggcaa aggtacaagg
1141 gccaagatgg aaattcggag gccgccatga agatccaagc cacatggaaa tgctacaaag
1201 caagaaaatt cttcctcttt tatcgccagc agaagtgggc atcaggtgtg attgccattg
1261 cttggctgtt atattgccat aagactcgac taaagaagat actaaaggaa tcacgtcaga
1321 gacacctgga gaattttcgc attcgagcca agcatctggc agccaactgg aatcgcatca
1381 ggacctccag gaggactatt atccatatcc catcattagg gtattcccag cctgtgagag
1441 aacatattgc cgatttcaac acacagcaga acatgcagct ggggaggctg tgtgacatct
1501 tagatgccaa tgtgaatgtc atctacatct gctcccatca tatgaatgac gagttagtgc
1561 tgtattacaa aaaaatccta agtctacatg cagccgtcaa atctgggaac cttgaggaca
1621 gaagtgacct gcaggacagg ttcaaaatta tcacacctga agctgtaaac atcttcccta
1681 agcatcatat gtgcctggcc actcacctga tgtacagtcc caaggcaatc aaaagaataa
1741 aaaatctcat ccgaggaaca gaggcctaca tcgtcagcgg gctcctccac agagatgatt
1801 tagctgtggc cgatatgtta gacataccca tcctgggctc tgagcctgaa ctagctcatc
1861 tttatagtac caaatctgga ggcaaacgtg tctttgacag tgccaatgtg gcagttcctc
1921 ctggaatata tgatatttat agtcagcaac agatgataga gcagctgagt cagctgataa
1981 ctgatcacct gcaaatacag cgctggctct ttaaaatgga ctctgagttc cgaggaaatg
2041 ggactgcatt ttgtgatatt ccttcctacc taaagtgcta caaatgggtg ctaaaggaga
2101 gtagcagata tggccttgaa gactggagaa agaaatgggc acaagagcca gctttggtga
2161 agatctctga ggagctggcg ggcattttag cacagcacgc acagccagtc aatgagaaac
2221 ggttcccgac gtggaggaaa ttcctccaaa catttctcag tcaagggggt gtgatcgaag
2281 cattcccacc tgcagacaat gtcaccaacc tcacagtgga catgctgata gagcccaacg
2341 ggaaaatcag cgtgctgtcg acaggggacc agcttcatgc tgaaagcccc ttcatctcct
2401 ctggtaccac cgtgcctcag acctcagtgg atccccaagt tctcacttat ttgtgcctcc
2461 aaattggaaa agcctgcaga atgagagatg tggttggtta cttttcgata gatctggtga
2521 cttttataga tccaagcacc ttggaacaac aggtgtgggc aaccggcctt aacctcgcat
2581 atagtgacca gctggccctg actcaactca ccttatacct gacaaacggc catctggatt
2641 gcagtttgag caccctggaa gtgccccgct ttgttccaaa ggaaaggaag aaaaccaaat
2701 gcatgagtgc gctgtcaatg ccgatgctgg caaccagtcg ctatgcagtg atgaccaccc
2761 agctaagaca cagcaatctc tcactggttt tccactatgt ttttctccag atctgtaggg
2821 cccatggcat tggctatgat cttgaggaaa ggcaaggaac tgtttttata ttatatgagc
2881 acctgaagag acacaagttg ggaatgttaa caatcggcga ggatctccag ggggtcctca
2941 tgacctttgc tcgccatctc ttcatcatcc atcaagaaat atcagcacct aatatgcaag
3001 gcgagaccaa ttttaagacc accattgctg atattgaaac tattctaaga gtaacaaagg
3061 aaaacaaaat gagatttgaa gaggagcaac agtccaaaga tgataaaaac ctctctaaac
3121 ccaagaaatg atcctggaat acagtacata acaatttgga tcccagtctg gaataaaaag
3181 ggcaattttt ttttctgtta gaaataaaag ccaggggaaa ttggtttgct ttgtgtgcta
3241 ggaggtgaat cagaacagat tataatgaaa tgctcttttt aaaacattgt ttattaagtg
3301 atcttatttt atttattaaa ccaaaactta tttgtgtttt caaaaaaaaa aaaaaaagaa
3361 aaaaaaaaaa aaa
//