LOCUS BC048796 1570 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens transmembrane protein 116, mRNA (cDNA clone MGC:54277
IMAGE:5193616), complete cds.
ACCESSION BC048796
VERSION BC048796.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1570)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1570)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: i Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308397.
FEATURES Location/Qualifiers
source 1..1570
/db_xref="H-InvDB:HIT000053336"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54277 IMAGE:5193616"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1570
/gene="TMEM116"
/gene_synonym="FLJ90167"
/db_xref="GeneID:89894"
/db_xref="HGNC:HGNC:25084"
CDS 420..1157
/gene="TMEM116"
/gene_synonym="FLJ90167"
/codon_start=1
/product="TMEM116 protein"
/protein_id="AAH48796.1"
/db_xref="GeneID:89894"
/db_xref="HGNC:HGNC:25084"
/translation="MKHTQSGQSTSPLVIDYTCRVCQMAFVFSSLIPLLLMTPVFCLG
NTSECFQNFSQSHKCILMHSPPSAMAELPPSANTSVCSTLYFYGIAIFLGSFVLSLLT
IMVLLIRAQTLYKKFVKSTGFLGSEQWAVIHIVDQRVRFYPVAFFCCWGPAVILMIIK
LTKPQDTKLHMALYVLQALTATSQGLLNCGVYGWTQHKFHQLKQEARRDADTQTPLLC
SQKRFYSRGLNSLESTLTFPASTSTIF"
BASE COUNT 478 a 350 c 297 g 445 t
ORIGIN
1 tagcaattcg tttgctgtcc ttcctctcct tcgaagatga caaggcctac catcgtttct
61 tcctgccttt gggccgtcag gcagttggtt gggacccgct ccaaccctcg gttcttcctg
121 caatacagtg gatacaattt gtcatggcta ctctgagtgt tataggttca agttcactta
181 ttgcctatgc tgtattccat aatatacaga aatctccaga gataagacca cttttttatc
241 tgagcttctg tgacctgctc ctgggacttt gctggctcac ggagacactt ctctatggag
301 cttcagtagc aaataaggac atcatctgct ataacctaca agcagttgga cagatattct
361 acatttcctc atttctctac accgtcaatt acatctggta tttgtacaca gagctgagga
421 tgaaacacac ccagagtgga cagagcacat ctccactggt gatagattat acttgtcgag
481 tttgtcaaat ggcctttgtt ttctcaagcc tgatacctct gctattgatg acacctgtat
541 tctgtctggg aaatactagt gaatgtttcc aaaacttcag tcagagccac aagtgtatct
601 tgatgcactc accaccatca gccatggctg aacttccacc ttctgccaac acatctgtct
661 gtagcacact ttatttttat ggtatcgcca ttttcctggg cagctttgta ctcagcctcc
721 ttaccattat ggtcttactt atccgagccc agacattgta taagaagttt gtgaagtcaa
781 ctggctttct ggggagtgaa cagtgggcag tgattcacat tgtggaccaa cgggtgcgct
841 tctacccggt ggccttcttt tgctgctggg gcccagctgt cattctaatg atcataaagc
901 tgactaagcc acaggacacc aagcttcaca tggcccttta tgttctccag gctctaacgg
961 caacatctca gggtctactc aactgtggag tatatggctg gacgcagcac aaattccacc
1021 aactaaagca ggaggctcgg cgtgatgcag atacccagac accattatta tgctcacaga
1081 agagattcta tagcaggggc ttaaattcac tggaatccac cctgactttt cctgccagta
1141 cttctaccat tttttgaaac tacaatactg gaacatccag gaactggagt tattctacgc
1201 taatggattg gaaagaatgt tgggaaagga catcttaaat cttttctaac tatgccctaa
1261 actgcagaac tcaaaggaaa tatagtgcca ttgttagtag tcattctaga tgaattggga
1321 gtatctctcc agttattccc agattcacta gtgatcctta aagtctctat tcagggagag
1381 gaagacactt tccatctcag agatagactc gtgttacctt gatggatatt ggatttgtct
1441 aagtctcttc tagaaaaaat aaattctaga ttattaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa
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