LOCUS BC048423 5595 bp mRNA linear HTC 09-SEP-2005
DEFINITION Homo sapiens dachshund homolog 2 (Drosophila), mRNA (cDNA clone
IMAGE:4818714), with apparent retained intron.
ACCESSION BC048423
VERSION BC048423.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5595)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5595)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: c Column: 15
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..5595
/db_xref="H-InvDB:HIT000099003"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4818714"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1786 a 1025 c 995 g 1789 t
ORIGIN
1 attgccaaca tggctgctgc agcacagatt cacagtccac tctccagagc tggtacctct
61 gttataaagg agcggatccc agagagtcct tctcctgctc cttctctaga agagaatcat
121 cgtcctggga gccagacctc ttcccacacc agcagcagtg tgtccagctc tccctctcag
181 atggatcatc atttggaaag aatggaagag gtaccagttc aaattccaat aatgaagtca
241 cccttggaca agatacagct gactcctggg caggcattgc ccgctggatt ccctggacca
301 ttcatttttg ctgatagtct gtcctccgtg gagactctgt tgaccaacat tcaggtcaac
361 aatatttcta taaacaaaat aaatggtctg ctgaaagttg ctttggataa tgctcgcatc
421 caggagaagc agattcaaca agaaaagaag gagctgcgac tggagctcta tagagagaga
481 gaaattagag aaaaccttga aagacaactt gcagttgagc ttcaaagcag aactactatg
541 caaaagcgcc tgaagaagga gaaaaaaacc aagagaaaat tgcaggaagc cttggaattt
601 gaatcaaagc gccgggagca agtggagcag gcacttaagc aagccaccac tagtgacagt
661 ggcctgagga tgttaaaaga tactggaatt ccagatattg aaatagaaaa caatgggact
721 cctcatgata gtgctgctat gcaagcctga acactgatgc cggaactcca actgatcata
781 ggcacgaata gggtgctgta gcagttacct gcttatctag tgttgtaaat tatttagaat
841 tcatactcaa atccttaaaa tatggaacct ttaattactg tttgttcatt actgataaat
901 agaaccttac acatacagga aaaatgtcct agagaatggg tttcacaggt ttttagggga
961 tagtcataat aatgactgaa cacattttac acttctttaa cctctttctt tcaaggagtt
1021 catagtgctt caaaaacatt atcacattaa ttcacacaga atcctagtgg ggtaagtagg
1081 tggaagaatt tttaagacag agaaaatgct atttctaaat ggtgtgagac aaattaaaat
1141 gcaggaacac ctactttaag ctgcaattac tgtgaaataa cttcttgtct gacctggtat
1201 ttaacaggaa ttatatcagg tggtgaatca tttgtgcaaa tgatcgatat ttgttatcac
1261 tgctttggag ctctcatttc taaaagaaac acttggcctg tagtgttctc taagaaaata
1321 taaggagctc tagtttttag attttaccac acccagtttt tcctttgaac tgttgatggt
1381 ggagcaagtc ctttaacccc tttctactag cacattcctg atttgtaaag aatgcaatga
1441 taaaaacaga tacccaagct gctaaaaata cccctttact attttcttct ctcctcccat
1501 ccccaatctt gcttcctctt tattaagcta ttaacaagca aacagaatga aaaatctata
1561 ggcataagaa aagagaaaga tgggtcagtg agattatgga tattttatac tgttcactct
1621 ctggtctaga catagccaga ttcctaacgt gttcaaatga ttaggaacat ttggcttgaa
1681 ttgcccagga aatggcctca aatattttta actgtttact tagaggagat ctgaccattg
1741 gctgggggca gatacctgtt atcattattt tgatgcctac taaaaatcta atagagcagc
1801 attccaatgt gttatatggt actctaatga tcaaaaagat ttaatgctcc tcctaaagtg
1861 ccctccttat attaaacaat atataatcca ttgtgttgtt ttcacgtctg ccctagcatt
1921 aagttctgat gtgacagaag caccaagcat ctcctgcaaa aagccaactg agtttttatc
1981 cattttctag taagaggttc cccatggcag tacatgcaat ttctgccgga atggccaccc
2041 actctaaaca cttaaaaata ttacattaat tcatatcgat gtgacatttc agtaattcca
2101 agctctgaag gaatgttttc taaagcataa gcatttggat tctggtattc ttcatgggct
2161 gtagaaggtc tgcttatata gagtaggtat actgttttag cccaattcag tgaaataatg
2221 ccaaattaga aataagtcat ggagaaggat tgaagcaagt caaataaaaa cttttattaa
2281 tatcaaatat ctgaaataaa taacagtgac aggtgactaa aaatataaca tccaagaaag
2341 tctcatcatt aaatggaatt tccaaattaa gttacttcaa aataaactag tgtcttttgt
2401 ttaaataagt agataagttt aacttacctt gtttgaacta tgaggactcc tcatgtgtat
2461 ttttttctgg ccttttccca tatatctgcc ttgtttatga tacatgattt tagctattcc
2521 ggctcatagg cttaggatat ataccacagg gcaagtctca catttacttg agtttggagc
2581 agctatttgt ggcccagtaa agataactca actgattagg agaggttcat ctcctgtgtg
2641 gagtgtccac actgaccttc tgtgtcatgg catatgccca tgtcaggcag tgctgtgcta
2701 aaggaaggat tacatggact tttgttttta ctttaaaaat ggtcacattt gtatgtatca
2761 aattcccctt tttacctatc tgataaatcc caaagcaata aactctgtca gctctcccca
2821 aatgtcagcg tgtgtccctc tttttaagtt ctcaagctcg gtaacattcc cctggagaga
2881 ctttgttagt ttctcttcct gatctttaat cttattgaca tccagagttc atatcagatc
2941 atctctgttt agagctcaag aacaaaccct tataagaaca tgaaacattc cattactaat
3001 tagctgtttc ctgttcctaa tgaagcgagc acactgagtc tggattaaaa ttcagctact
3061 actcctctct gtttatggtt ccagatgttt ttggtttatg taggagatta ctttgacagc
3121 tactactaag tgataaatca ctcatattat agctgaaatg cattttgaaa ttgaaatgtg
3181 gcaaactttg agattgctcc aaggatcagt gtcagcagtt cattactggc atcttcctta
3241 tgatcattca gcattggcac atgtaaaaca gtaaccaaat atgtgtcaac attatacaac
3301 atgctacaca ggggtctgtt tcgctactgt cctcaaaatt gggagaaaaa gttttactac
3361 ggtgaaatct caatttattg tattctggta gaaaagttga ttcacttaat attgttttct
3421 tcttgctagc ctagtttttc tttcaatttt tgaggagcta tgggaactat tcctaatagg
3481 ccttgtaagc agacacataa aggatgtggg caaatattta tgtctctaaa taaaggcaag
3541 aaataaacat aacaaaagta gaaatttttc agaaactgca tttttctaaa ggacaaatgg
3601 tgattgtctt tcgctattca ttgctgagtt catgtaccct ttttaaggag acatagtgtg
3661 tgctattgct ttccagtttg taatgttcac agtttgtgtt gcatgattta agctttagct
3721 atattgtata aatttcaatc ctggtaaaat gactgtcatt tcatgtcaaa gagctttcct
3781 ttgacattta ggctgtgtat acaaaggatg aggtagactg gaggactgag caaatatttg
3841 gtcaattcat cagagtaaat attctcagac tccacaaagg agttggaaca attaccagtg
3901 tccaaaaatt caagctttgt tttcttctgg tccctggaaa agtttaagtg aattccatgg
3961 gcttcttggg aaaatgtctg gttgccctct gatgaagtcc aaccctccat aagtctgact
4021 aacccaaacc ccaaatcttt tattcatcta ttaccttact acatctttat ttttggttct
4081 gaggtattat ctagaaaatt ctgccactca ccatgatacc ttatacacag aaagaataaa
4141 gattttaaag atattataca caaggttaaa aaagggtata ctttcctcct aataagcttg
4201 accagattga cttaatattt tagattagac atattagtcc aacaatgata atgtcctctc
4261 cattatatgt gaaaataaag cacttgactc agaaacatta tctttaagta tttctcaagc
4321 acaggtaatg gatttgtacg gattcatcca catttctttt cctacttctt ttgtaaccaa
4381 aagccaatct ttgtgatgta tctaaataga gactcaggtt ataagccatt gctatggaaa
4441 ataacaaggt ttgacaaaaa gaggtagaat aaattttttt ttaaaaattt ccaacaataa
4501 cttttaccca cccaaattaa atattatcta actctaggat ggcatgggct cttttaatga
4561 ctatcattta gagggatacc ggtttgacta aacactgtag ctgaaacgat attccaaact
4621 agtctccctt catgcagtat acacagtctc agggttaacc cgggagagga aattttaaat
4681 gtacaaagct gtcattatct tagatcataa ccagatactc ttttccccct gttttggtaa
4741 accacaggga tggtatttca gatgcaccat tatatacaaa aagaaaaagt aatatagatt
4801 attacagaca ttataatata gttcatgaag agcctttatc agtcttcaat gtctccggtg
4861 ctgtggaaag aagaacagaa gctatagcat gaaatttgaa ggatctttga aaactgacag
4921 atgaaaatat agaaatgtta agaaatgtta aattttacca acactaaatt gagcctgtta
4981 catcagatca ttttaggttc ctgaagatag aagttttagt atttttaagc acgtatcaga
5041 atgactcttc ataagaacta acttgttttc ttttttttta aggaggtaac tattactgtt
5101 tagaaatggc acaacagttg tattcggcct gaaaggtcct cgctggcttt acataaatga
5161 agatgcttgt gattccagtt tatctctgaa actattcaac atggagttat ttcagttttg
5221 tttatcagca aagctttgtt tactgaagga gctatttaat ctatgttaca ttaaaaaaga
5281 aacgcgtgta cattttaaaa gcaatgatgt aaactttgtt cttgcattag actgaccagt
5341 ttaaaaatat gaactaaatc ctaatggcta aagtaacttg accatatttg atgcttttct
5401 atgctcaatt caacttggct ttttgtcttt taaattttta aaaaatgcag tagtgtgtta
5461 gagactagaa agttatatgt atggtttccc tgttctacta tacataacgt taaagtacac
5521 cttctttgtt aaaaatgtac ttgctaaact tcagcgtaaa taaaaacatt ttgactttga
5581 aaaaaaaaaa aaaaa
//