LOCUS BC048350 2927 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens zinc finger protein 84, mRNA (cDNA clone MGC:54253
IMAGE:5555056), complete cds.
ACCESSION BC048350
VERSION BC048350.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2927)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2927)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: p Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4508036.
FEATURES Location/Qualifiers
source 1..2927
/db_xref="H-InvDB:HIT000098996_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54253 IMAGE:5555056"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2927
/gene="ZNF84"
/gene_synonym="HPF2"
/db_xref="GeneID:7637"
/db_xref="HGNC:HGNC:13159"
CDS 28..2244
/gene="ZNF84"
/gene_synonym="HPF2"
/codon_start=1
/product="zinc finger protein 84"
/protein_id="AAH48350.2"
/db_xref="GeneID:7637"
/db_xref="HGNC:HGNC:13159"
/translation="MTMLQESFSFDDLSVDFTQKEWQLLDPSQKNLYKDVMLENYSSL
VSLGYEVMKPDVIFKLEQGEEPWVGDGEIPSSDSPEVWKVDGNMMWHQDNQDKLKIIK
RGHECDAFGKNFNLNMNFVPLRKSNSEGDLDGLILKHHLDLLIPKGDYGKAESDDFNV
FDNFFLHSKPEDTDTWLKYYDCDKYKESYKKSQIIIYHRNRLGEKLYECSECRKRFSK
KPSLIKHQSRHIRDIAFGCGNCGKTFPQKSQFITHHRTHTGEKPYNCSQCGKAFSQKS
QLTSHQRTHTGEKPYECGECGKAFSRKSHLISHWRTHTGEKPYGCNECGRAFSEKSNL
INHQRIHTGEKPFECRECGKAFSRKSQLVTHHRTHTGTKPFGCSDCRKAFFEKSELIR
HQTIHTGEKPYECSECRKAFRERSSLINHQRTHTGEKPHGCIQCGKAFSQKSHLISHQ
MTHTGEKPFICSKCGKAFSRKSQLVRHQRTHTGEKPYECSECGKAFSEKLSLTNHQRI
HTGEKPYVCSECGKAFCQKSHLISHQRTHTGEKPYECSECGKAFGEKSSLATHQRTHT
GEKPYECRDCEKAFSQKSQLNTHQRIHTGEKPYECSLCRKAFFEKSELIRHLRTHTGE
KPYECNECRKAFREKSSLINHQRIHTGEKPFECSECGKAFSRKSHLIPHQRTHTGEKP
YGCSECRKAFSQKSQLVNHQRIHTGEKPYRCIECGKAFSQKSQLINHQRTHTVKKS"
BASE COUNT 1043 a 522 c 640 g 722 t
ORIGIN
1 gctgatcatc tcgtacagca gcagaaaatg accatgttac aggagtcatt ctcatttgac
61 gatttatctg tggacttcac ccaaaaggag tggcagctac tggatccctc tcagaagaat
121 ttatacaagg atgtgatgtt ggagaactat agcagcctag tgtcactggg gtatgaagtt
181 atgaaaccag atgtcatctt caaattggag caaggagaag agccgtgggt aggagatgga
241 gaaattccaa gttcagattc tccagaagtc tggaaagtag atggtaacat gatgtggcac
301 caggataacc aagacaagct taaaattata aaaagaggtc atgaatgtga tgcatttgga
361 aaaaatttca atctgaacat gaactttgtt cctttaagga aatcaaacag tgaaggtgac
421 ttagatggat tgattttaaa acatcattta gatttgctta ttccaaaagg agattatgga
481 aaagcagaat cagatgactt taatgtgttt gataattttt ttctccattc caagcctgag
541 gatactgata cctggttaaa atactatgac tgtgataaat ataaagagag ctataaaaag
601 tcacagatta tcatatatca tagaaatcgt ttaggggaga aactctatga atgcagtgaa
661 tgtaggaagc gcttcagtaa gaaaccaagt ctcattaaac atcagagcag acatataaga
721 gacatagcct ttggctgtgg taattgtggc aaaacctttc cccagaagtc tcagtttatt
781 acacatcaca gaactcatac aggagaaaaa ccttataatt gtagccagtg tgggaaagcc
841 ttctcccaaa agtcacagct cacatcccat cagcggacac atacaggaga gaaaccttat
901 gagtgtggtg aatgtgggaa agccttctcc cggaagtcac atctcatatc gcattggaga
961 acacacacag gagagaaacc ctatggatgc aatgaatgtg ggagggcctt tagtgaaaag
1021 tccaatctca ttaaccatca gagaattcat accggtgaga agccttttga atgcagggaa
1081 tgtgggaaag ccttcagcag gaagtcacaa ctcgttacac atcacagaac tcacacagga
1141 acaaaaccct ttggatgtag tgattgtaga aaagccttct ttgagaagtc agagcttatt
1201 agacatcaga caattcatac tggagagaaa ccctatgaat gcagcgagtg taggaaagca
1261 tttagagaga ggtcgagtct cattaatcat cagagaacac atacaggaga gaaacctcat
1321 ggatgcattc agtgtgggaa ggccttctcc cagaagtcac atctcatatc acatcagatg
1381 acacacacag gagaaaaacc ctttatatgc agtaaatgtg ggaaagcctt cagcaggaaa
1441 tcacagctcg ttagacatca gagaactcat acgggagaaa aaccgtatga atgcagtgag
1501 tgtgggaaag ctttcagtga aaaattaagt ctcactaatc atcaaagaat tcatacagga
1561 gaaaaaccat atgtatgcag tgaatgtggg aaagcctttt gtcagaagtc acatctcata
1621 tcacatcaga ggacacatac aggggagaaa ccctatgaat gcagtgaatg tgggaaggcc
1681 tttggtgaga agtcaagtct tgcaactcat cagagaactc atactggaga aaaaccgtat
1741 gaatgcaggg actgtgaaaa agctttctcc cagaaatcac agctaaatac ccatcagaga
1801 attcacactg gagagaaacc ctatgaatgc agtctttgta ggaaagcttt ttttgagaag
1861 tcggagctaa ttagacatct gagaactcat acaggagaaa aaccttatga atgcaatgaa
1921 tgtagaaaag ccttcaggga gaagtcaagt ctcatcaatc atcagagaat acatacagga
1981 gagaagcctt ttgaatgcag tgagtgtggc aaagctttct ctcggaagtc acaccttata
2041 ccacatcaaa ggacacatac gggtgagaaa ccctatggat gcagtgaatg taggaaggcc
2101 ttctctcaga agtcacagct ggttaatcat cagagaattc atacaggaga gaagccttat
2161 cgatgcattg aatgtgggaa agctttctca cagaagtcac agctcatcaa tcatcagaga
2221 actcatacag taaaaaaatc ctaggaatac agttaatagt agtctttgac agatcatctt
2281 ggacttcagg aaatgcaatt atgataacgt ttgtagacag tcacgtcatg ttaggtgtct
2341 gtactccatg aggatgagaa ctctaaatga ggtggtgtat ggaaagccga tcataattca
2401 tagagtagag tgaacctatg actgcagtgg atctcaaaaa cttttaaaac catagacaag
2461 ccttatagag tagaacattc acagcaaaga agaatcctgt gaatgtccaa aagccttcca
2521 gaagtcaagt ctcttaagct attagaaata ttcccactgg ggatgaggga aaaccccatg
2581 aatgcgggaa atgaggcaat atttttaaga aatgacagtt cattgtacat aagaaaatgc
2641 tcttaggaat gaagttctat gaaagtacta aatatgggac agtgcaacaa gtaaccagac
2701 tattttgtat tttggagaat tcatattatg gagaacctaa caatttaaag acactgggaa
2761 cacttgcccc tcagtatagt actgtcaagg gaagccatac actttttgta gacatgggta
2821 ccaaaaatac ccaattctaa gtggttgaca gatgttcact ttgaagtgtg aagttttaaa
2881 aatacgtgaa taaattggtt attgaaacat caaaaaaaaa aaaaaaa
//