LOCUS BC048324 1670 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens hemogen, mRNA (cDNA clone MGC:54084 IMAGE:5166612),
complete cds.
ACCESSION BC048324
VERSION BC048324.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1670)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1670)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: f Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37574621.
FEATURES Location/Qualifiers
source 1..1670
/db_xref="H-InvDB:HIT000053325"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:54084 IMAGE:5166612"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1670
/gene="HEMGN"
/gene_synonym="EDAG"
/gene_synonym="EDAG-1"
/db_xref="GeneID:55363"
/db_xref="HGNC:HGNC:17509"
CDS 116..1567
/gene="HEMGN"
/gene_synonym="EDAG"
/gene_synonym="EDAG-1"
/codon_start=1
/product="hemogen"
/protein_id="AAH48324.1"
/db_xref="GeneID:55363"
/db_xref="HGNC:HGNC:17509"
/translation="MDLGKDQSHLKHHQTPDPHQEENHSPEVIGTWSLRNRELLRKRK
AEVHEKETSQWLFGEQKKRKQQRTGKGNRRGRKRQQNTELKVEPQPQIEKEMEKALAP
IEKKTEPPGSITKVFPSVASPQKVVPEEHFSEICQESNIYQENFSEYQEIAVQNHSSE
TCQHVSEPEDLSPKMYQEISVLQDNSSKICQDMKEPEDNSPNTCQVISVIQDHPFKMY
QDMAKREDLAPKMCQEAAVPKILPCPTSEDTADLAGCSLQAYPKPDVPKGYILDTDQN
PAEPEEYNETDQGIAETEGLFPKIQEIAEPKDLSTKTHQESAEPKYLPHKTCNEIIVP
KAPSHKTIQETPHSEDYSIEINQETPGSEKYSPETYQEIPGLEEYSPEIYQETSQLEE
YSPEIYQETPGPEDLSTETYKNKDVPKECFPEPHQETGGPQGQDPKAHQEDAKDAYTF
PQEMKEKPKEEPGIPAILNESHPENDVYSYVLF"
BASE COUNT 691 a 343 c 304 g 332 t
ORIGIN
1 ccagaagtta tgaagatagg tactgtgggt gttagaaaga ttcacggcaa aacagggaag
61 catctaggct gcttgtggaa gtcagaccaa aatagcagga aggtattgca gcaagatgga
121 tttgggaaag gaccaatctc atttgaagca ccatcagaca cctgaccctc atcaagaaga
181 gaaccattct ccagaagtca ttggaacctg gagtttgaga aacagagaac tacttagaaa
241 aagaaaagct gaagtgcatg aaaaggaaac atcacaatgg ctatttggag aacagaaaaa
301 acgcaagcag cagagaacag gaaaaggaaa tcgaagaggc agaaagagac aacaaaacac
361 agaattgaag gtggagcctc agccacagat agaaaaggaa atggagaaag cactggcacc
421 tatagagaaa aaaactgagc cacctgggag cataaccaaa gtatttcctt cagtagcctc
481 cccgcaaaaa gttgtgcctg aggaacactt ttctgaaata tgtcaagaaa gtaacatata
541 tcaggagaat ttttctgagt accaagaaat agcagtacaa aaccattctt ctgaaacatg
601 ccaacatgtg tctgaacctg aagacctctc tcctaaaatg taccaagaaa tatctgtact
661 tcaagacaat tcttccaaaa tatgccaaga catgaaggaa cctgaagaca actctcctaa
721 cacatgccaa gtaatatctg taattcaaga ccatcctttc aaaatgtacc aagatatggc
781 taaacgagaa gatctggctc ctaaaatgtg ccaagaagct gctgtaccca aaatccttcc
841 ttgtccaaca tctgaagaca cagctgatct ggcaggatgc tctcttcaag catatccaaa
901 accagatgtg cctaaaggct atattcttga cacagaccaa aatccagcag aaccagagga
961 atacaatgaa acagatcaag gaatagctga gacagaaggc ctttttccta aaatacaaga
1021 aatagctgag cctaaagacc tttctacaaa aacacaccaa gaatcagctg aacctaaata
1081 ccttcctcat aaaacatgta acgaaattat tgtgcctaaa gccccctctc ataaaacaat
1141 ccaagaaaca cctcattctg aagactattc aattgaaata aaccaagaaa ctcctgggtc
1201 tgaaaaatat tcacctgaaa cgtatcaaga aatacctggg cttgaagaat attcacctga
1261 aatataccaa gaaacatccc agcttgaaga atattcacct gaaatatacc aagaaacacc
1321 ggggcctgaa gacctctcta ctgagacata taaaaataag gatgtgccta aagaatgctt
1381 tccagaacca caccaagaaa caggtgggcc ccaaggccag gatcctaaag cacaccagga
1441 agatgctaaa gatgcttata cttttcctca agaaatgaaa gaaaaaccca aagaagagcc
1501 aggaatacca gcaattctga atgagagtca tccagaaaat gatgtctata gttatgtttt
1561 gttttaacaa tgctcaacca taaagttgtg gtccaatgga acatacaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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