LOCUS BC048297 2030 bp mRNA linear HTC 20-OCT-2005
DEFINITION Homo sapiens family with sequence similarity 86, member B1, mRNA
(cDNA clone IMAGE:5240978), with apparent retained intron.
ACCESSION BC048297
VERSION BC048297.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2030)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2030)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: l Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24211014
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2030
/db_xref="H-InvDB:HIT000098958"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5240978"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 579 a 557 c 477 g 417 t
ORIGIN
1 gttatggcgc ccgaggagaa cgcggggacc gaactcttgc tgcagggttt tgagcgccgc
61 ttcctggcgg tgcgcacact gcgctccttc ccctggcaga gcttagaggc aaagttaaga
121 gactcatcat attctgagct gctgcgggat attttgcaga agtcctcagg aggctcggtc
181 acactctcca agagcacagc catcatctcc cacggtacca caggcctggt cacatgggat
241 gccgccctct accttgcaga atgggccatc gagaacccgg cagccttcat taacagacgt
301 gctgtattgc ccagaagcca tcgtgtcgct ggtcggggtc ctgcagaggc tggctgcctg
361 ccgggagcac aagcgggctc ctgaggtcta cgtggccttt accgtccgca acccagagac
421 gtgccagctg ttcaccaccg agctaggccg ggatgggatc agatgggaag cagaagctca
481 tcatgaccag aaactgtttc cctatggaga gcacttggag atggcaatgc tgaacctcac
541 actgtaggac tcacacatga ctccaaaggg attgtgagaa tcaagtcact ctcgtgggaa
601 gaatttttat atgggaaagt ggataaaact ttcattggac tggaatgttt ggagattatt
661 aaattccaaa tcaggaatca aaactgccct ctaataagac attagctgtc taggcgtgtg
721 ggtgccccct ttctgccagc agttctggtt ctcaagaaaa tcatcataaa tcagacatga
781 aaattctggc tccaaaaata gcattttctt tctgcaaata aaaacgtgtg tatcaaggat
841 gacgttcccc caacgtggac acactcggtt cctcagaaag ccaagcccgc tgcagctgcc
901 acatccctgg acacactcgg ttcctcacaa agccaagccc gctgcagctg ccacatccca
961 gggcttatgg tgcagcaggc gcttttttca agacaggaat gaaagtgtta ggaacatggc
1021 agaaaggtga cacctggaga ccaaatgcag gatgaggagt actgcagagg tcacagggaa
1081 gtcacagaac agtaatacgc tagcaggggc atggggcatg aagaacagaa gacaggaagc
1141 atttcagaga ctccaaagaa gaaatcaggg ccaaccacag cttcccgggt cattcaccag
1201 gtgacaccac tgccgtcatt tcagcttctg gccactggga ggcgctgctc gaaaggcttt
1261 gccctgagac tccaagaagc tgcgggaagg acagcagggg ccctggggtt ttagcctctg
1321 gcccaggagt tatgtgtcca taaccaaagg gagcacagtc tgcacccagc tctcatccca
1381 tcagagctgc tgagactctt gcaggttctt ccagaactgg tttagcttgc ctgcaggatc
1441 agaaaagttt gagaaaagca tctgcaaaat gctaaagagc agagcttaac tcattgcctg
1501 tccccacccc atcccaggtc accacttgga tgaccccagg tccccgaccc aacaacaacc
1561 cctcccaagt ccctaactcc ctcacttgga cttgagaccc ttcacaaccc ccctcacttg
1621 gacttgagac ccttcacaac ccagcagcgc tccacctcca acttgacatc atgctttctg
1681 gaaacttccc cgtatgtccc actttcccac acttggtgcc ctggagcacc ttccggcctc
1741 tacatgctgt acgttcccct gtgagcaccc tcctctcggc ctctggccaa cacagtccca
1801 cccatctgtg ggtaacaagg gggtgtgggt gttcttttca gccttgctaa actgtctgaa
1861 tcaaggatca caaactacag cctgcaggcc aaatccagcc cacagcctgt gtttgtgaat
1921 aaagctttgt tggaacaaag ccacaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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