LOCUS BC048286 1683 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens SYS1 Golgi-localized integral membrane protein homolog
(S. cerevisiae), mRNA (cDNA clone MGC:51951 IMAGE:5212523),
complete cds.
ACCESSION BC048286
VERSION BC048286.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1683)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1683)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 93 Row: j Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56676380.
FEATURES Location/Qualifiers
source 1..1683
/db_xref="H-InvDB:HIT000053316"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:51951 IMAGE:5212523"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1683
/gene="SYS1"
/gene_synonym="dJ453C12.4"
/gene_synonym="dJ453C12.4.1"
/db_xref="GeneID:90196"
/db_xref="HGNC:HGNC:16162"
CDS 150..620
/gene="SYS1"
/gene_synonym="dJ453C12.4"
/gene_synonym="dJ453C12.4.1"
/codon_start=1
/product="SYS1 Golgi-localized integral membrane protein
homolog (S. cerevisiae)"
/protein_id="AAH48286.1"
/db_xref="GeneID:90196"
/db_xref="HGNC:HGNC:16162"
/translation="MAGQFRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSS
PSLDQMFDAEILGFSTPPGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFH
LLGCWFYSSRFPSALTWWLVQAVCIALMAVIGEYLCMRTELKEIPLNSAPKSNV"
BASE COUNT 401 a 444 c 429 g 409 t
ORIGIN
1 cgctcctgcc gccgtggtcg ctggagcttt gcctctctag gccggcagcg cctctcctcc
61 atggtcctgt ctgtcagcgc tgttttggga gcccgccggt gaggccgggc cacgctcaga
121 cacttcgatc gtcgagtctg tcactgggca tggcgggtca gttccgcagc tacgtgtggg
181 acccgctgct gatcctgtcg cagatcgtcc tcatgcagac cgtgtattac ggctcgctgg
241 gcctgtggct ggcgctggtg gacgggctag tgcgaagcag cccctcgctg gaccagatgt
301 tcgacgccga gatcctgggc ttttccaccc ctccaggccg gctctccatg atgtccttca
361 tcctcaacgc cctcacctgt gccctgggct tgctgtactt catccggcga ggaaagcagt
421 gtctggattt cactgtcact gtccatttct ttcacctcct gggctgctgg ttctacagct
481 cccgtttccc ctcggcgctg acctggtggc tggtccaagc cgtgtgcatt gcactcatgg
541 ctgtcatcgg ggagtacctg tgcatgcgga cggagctcaa ggagataccc ctcaactcag
601 cccctaaatc caatgtctag aatcaggccc tttggacatc ctgctgacac ttgggcccct
661 taacaccttg ggctgctcag accctccaga tgaggtccag cccagatctg agaggaaccc
721 tggaaatgtg aagtctctgt tggtttggga gagatagtga gggcctgtca aagaaggcag
781 gtagcagtca gcatgacagc tgcaagaatg acctctgtct gttgaagcct tggtatctga
841 gaggtcagga aggggacctc tttgagggta ataacagaat tggaaccatg ccactcttga
901 gccacaatac ctgtcaccag cctgttgttt taagagagaa aaaaaatcaa ggatatctga
961 ttggagcaaa ccacttcttt agtcatctgt cttacccccc tgggacagct gttacctttg
1021 cagtgttgcc gaatcacagc agttaccttt gcagtgttgc cgaatcacag cagttctgtt
1081 ggagaaacgc ttggtttccg gatccagagc cacagaaaga aatgtaggtg tgaagtatta
1141 ggctgctgtc agggagagga tggcagatgg aggcatcaag cacaaggaaa atgcacaacc
1201 tgtgccctgt tatacacacg ttcatgtgca cccaagaacc tatgactttc ttccagttcc
1261 ttctaccagg tccccatcct gctgccagct ctcaacatag caggccatag gacccagaga
1321 agaatcccag cgttgctcaa agtctaacca tcataaagac actgcctgtc ttctaggaat
1381 gaccaggcac ccagctccca ctggactcca attttttttc ctgccttatt tagaattctt
1441 tggcgggaag ggtatgatgg gttcccagag acaagaagcc caaccttctg gcctgggctg
1501 tgctgatagt gctgagggag ataggaattt gctgctaaga tttttctttg gggtggagtt
1561 tcctctgtga ggggcttgca gctatccttc ctgtgtatac aaatacagta ttttccatgg
1621 ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaa
//